RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 DUX4L2P0CJ85 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L3P0CJ86 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L4P0CJ87 422 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L5P0CJ88 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L6P0CJ89 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L7P0CJ90 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 RGS6P49758 472 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 ELF3P78545 371 aaPredicted RBP12.66□□□□□ -0.38
SSR4-204ENST00000370087 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4L9Q6RFH8 374 aaPredicted RBP12.66□□□□□ -0.38
SSR4-204ENST00000370087 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 NRMQ8IXM6 262 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 PNLDC1Q8NA58 520 aaKnown RBP12.66□□□□□ -0.38
SSR4-204ENST00000370087 OR11L1Q8NGX0 322 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 RASSF5Q8WWW0 418 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 ELAC2Q9BQ52 826 aaKnown RBP12.66□□□□□ -0.38
SSR4-204ENST00000370087 DPAGT1Q9H3H5 408 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 ERVK-18Q9QC07 812 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 DUX4Q9UBX2 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 FOXJ3Q9UPW0 622 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 COA3Q9Y2R0 106 aaPredicted RBP12.66□□□□□ -0.38
SSR4-204ENST00000370087 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 LGALS8O00214 317 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 CDC42EP2O14613 210 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 SLC22A2O15244 555 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 GYPAP02724 150 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 LIPFP07098 398 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 ANOS1P23352 680 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 SLC9A3P48764 834 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 GYS2P54840 703 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 POU4F2Q12837 409 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.381e-16■□□□□ 8.2
SSR4-204ENST00000370087 NFYCQ13952 458 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 MEP1BQ16820 701 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 OXLD1Q5BKU9 147 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 CORO6Q6QEF8 472 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 BTN2A1Q7KYR7 527 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 REC114Q7Z4M0 266 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
SSR4-204ENST00000370087 OAFQ86UD1 273 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 SYT4Q9H2B2 425 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 RERGLQ9H628 205 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
SSR4-204ENST00000370087 RHCGQ9UBD6 479 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 ATPIF1Q9UII2 106 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 LHFPL6Q9Y693 200 aa12.65□□□□□ -0.38
SSR4-204ENST00000370087 A0A1W2PRD5 423 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 A0A1W2PRF3 423 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 A0A1W2PRM7 423 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 J3KTA2 159 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 SLC16A7O60669 478 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 GPR4P46093 362 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 YAP1P46937 504 aaKnown RBP12.64□□□□□ -0.39
SSR4-204ENST00000370087 LOXL3P58215 753 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 LSM6P62312 80 aaKnown RBP12.64□□□□□ -0.39
SSR4-204ENST00000370087 HIST1H3AP68431 136 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 PRKCDQ05655 676 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 KLRD1Q13241 179 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 GK2Q14410 553 aaPredicted RBP12.64□□□□□ -0.39
SSR4-204ENST00000370087 KRTAP27-1Q3LI81 207 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 RABL3Q5HYI8 236 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 COLCA1Q6ZS62 124 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 NAA40Q86UY6 237 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 CALHM3Q86XJ0 350 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 LYG1Q8N1E2 194 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 PNKDQ8N490 385 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 LRTOMTQ8WZ04 291 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 PRRC1Q96M27 445 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 ZNF570Q96NI8 536 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 RNF7Q9UBF6 113 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 BAG5Q9UL15 447 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
SSR4-204ENST00000370087 IGHV3OR15-7A0A075B7D8 119 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 DVL1O14640 695 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 GPR37O15354 613 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 CD14P08571 375 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 VSIG8P0DPA2 414 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 RPL4P36578 427 aaKnown RBP12.63□□□□□ -0.39
SSR4-204ENST00000370087 KRR1Q13601 381 aaKnown RBP12.63□□□□□ -0.39
SSR4-204ENST00000370087 OR8B8Q15620 311 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 C1orf122Q6ZSJ8 110 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 PTCHD4Q6ZW05 846 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 FAM90A1Q86YD7 464 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 PPP1R35Q8TAP8 253 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 ERGIC1Q969X5 290 aa12.63□□□□□ -0.39
SSR4-204ENST00000370087 COQ7Q99807 217 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms