RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 OR52D1Q9H346 318 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 GORASP2Q9H8Y8 452 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 UNKLQ9H9P5 680 aaKnown RBP13.37□□□□□ -0.27
CKS1B-202ENST00000368436 PNRC2Q9NPJ4 139 aaKnown RBP13.37□□□□□ -0.27
CKS1B-202ENST00000368436 CYB5R1Q9UHQ9 305 aa13.37□□□□□ -0.27
CKS1B-202ENST00000368436 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
CKS1B-202ENST00000368436 GGT2P36268 569 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 CD200P41217 278 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 PITPNBP48739 271 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 SMIM11AP58511 58 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 DBPQ10586 325 aaPredicted RBP13.36□□□□□ -0.27
CKS1B-202ENST00000368436 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 NLRC3Q7RTR2 1065 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 JAZF1Q86VZ6 243 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 LINC00346Q8IVM7 164 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 FITM2Q8N6M3 262 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 OR4K13Q8NH42 304 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 CMTM5Q96DZ9 223 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 PITX2Q99697 317 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 ATF6BQ99941 703 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 NUDT16L1Q9BRJ7 211 aaKnown RBP13.36□□□□□ -0.27
CKS1B-202ENST00000368436 MYLK2Q9H1R3 596 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
CKS1B-202ENST00000368436 OR6C68A6NDL8 312 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 F5H5K5 113 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 KCNAB3O43448 404 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 IDH3BO43837 385 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 GADD45GO95257 159 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 IRF2P14316 349 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 PSMB10P40306 273 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 PRSS12P56730 875 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 TRAP1Q12931 704 aaKnown RBP13.35□□□□□ -0.27
CKS1B-202ENST00000368436 MALLQ13021 153 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 CLEC12AQ5QGZ9 265 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 WDR25Q64LD2 544 aaPredicted RBP13.35□□□□□ -0.27
CKS1B-202ENST00000368436 OR2AJ1Q8NGZ0 328 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 SLCO4A1Q96BD0 722 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 PYURFQ96I23 114 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 CDADC1Q9BWV3 514 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 SLITRK2Q9H156 845 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 RPRD1BQ9NQG5 326 aaKnown RBP13.35□□□□□ -0.27
CKS1B-202ENST00000368436 CLN8Q9UBY8 286 aa13.35□□□□□ -0.27
CKS1B-202ENST00000368436 TRAV40A0A0B4J280 105 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 PHYHO14832 338 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 FAM20BO75063 409 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 GMNNO75496 209 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 PTBP3O95758 552 aaKnown RBP13.34□□□□□ -0.27
CKS1B-202ENST00000368436 LCATP04180 440 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 PRDX6P30041 224 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 GSSP48637 474 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 C16orf87Q6PH81 154 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 RNF148Q8N7C7 305 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 OR10S1Q8NGN2 331 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 OR11L1Q8NGX0 322 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 MAP6Q96JE9 813 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 MRPL22Q9NWU5 206 aaKnown RBP13.34□□□□□ -0.27
CKS1B-202ENST00000368436 ADA2Q9NZK5 511 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 KCNG2Q9UJ96 466 aa13.34□□□□□ -0.27
CKS1B-202ENST00000368436 TRRAPQ9Y4A5 3859 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 MDFIC2A0A1B0GVS7 189 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 OR10H3O60404 316 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 NOS3P29474 1203 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 TPTEP56180 551 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 BPIFB3P59826 476 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 FGF12P61328 243 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 SPIBQ01892 262 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 MPPED2Q15777 294 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 PRAMEF6Q5VXH4 476 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 PGAP1Q75T13 922 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 SDR9C7Q8NEX9 313 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.28
CKS1B-202ENST00000368436 DDOQ99489 341 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 SLC22A4Q9H015 551 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 FN3KQ9H479 309 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 TMCC3Q9ULS5 477 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 MMP24Q9Y5R2 645 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 V9GYQ6 96 aa13.33□□□□□ -0.28
CKS1B-202ENST00000368436 C22orf46C9J442 243 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 TNFRSF13BO14836 293 aaPredicted RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 HLA-DQA2P01906 255 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 HSD17B1P14061 328 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 IFNGR2P38484 337 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 NPY4RP50391 375 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 TSPAN31Q12999 210 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 OR8G1Q15617 311 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 BRD3OSQ6XYD6 125 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF620Q6ZNG0 422 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 MRPL21Q7Z2W9 205 aaKnown RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 C19orf18Q8NEA5 215 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms