RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CCSO14618 274 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 CDX4O14627 284 aaPredicted RBP13.14□□□□□ -0.31
PRKN-204ENST00000366896 HCRTR2O43614 444 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 NPIPB7O75200 414 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 HLA-DQA2P01906 255 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 IGFBP3P17936 291 aaPredicted RBP13.14□□□□□ -0.31
PRKN-204ENST00000366896 CAPZA1P52907 286 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 GUSBP11Q6P575 273 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 TMEM71Q6P5X7 295 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.14□□□□□ -0.31
PRKN-204ENST00000366896 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 C8orf44Q96CB5 159 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 CMSS1Q9BQ75 279 aaKnown RBP13.14□□□□□ -0.31
PRKN-204ENST00000366896 TLNRD1Q9H1K6 362 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 ATG5Q9H1Y0 275 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 SOHLH2Q9NX45 425 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 FRYLO94915 3013 aa13.14□□□□□ -0.31
PRKN-204ENST00000366896 IGLV1-36A0A0B4J1U3 117 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 IGHV5-51A0A0C4DH38 117 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 DOK2O60496 412 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 DXOO77932 396 aaKnown RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 SNAPINO95295 136 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 CRYBA1P05813 215 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 CD2P06729 351 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 PNLIPP16233 465 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 PGCP20142 388 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 KCNJ3P48549 501 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 NR0B1P51843 470 aaKnown RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 TMEM225Q6GV28 225 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 PLPP7Q8NBV4 271 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 TGM7Q96PF1 710 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 ZNF587Q96SQ5 575 aaPredicted RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 GAL3ST1Q99999 423 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 OR6C76A6NM76 312 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 FADS1O60427 444 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 ALOX12BO75342 701 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
PRKN-204ENST00000366896 HEXAP06865 529 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 CD79AP11912 226 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 C5orf46Q6UWT4 87 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 MARCH3Q86UD3 253 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 CATSPERDQ86XM0 798 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 TMEM151BQ8IW70 566 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 TMEM100Q9NV29 134 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 DHDHQ9UQ10 334 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
PRKN-204ENST00000366896 RP1P56715 2156 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 NUDT19A8MXV4 375 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 LDLRAD4O15165 306 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 DDAH2O95865 285 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 OR1D4P47884 311 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 NPBWR1P48145 328 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 EFNA3P52797 238 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 PNLIPRP2P54317 469 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 GTPBP8Q8N3Z3 284 aaPredicted RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 OR5AP2Q8NGF4 316 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 OR13C8Q8NGS7 320 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 C2CD4CQ8TF44 421 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 ARL11Q969Q4 196 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 OTOGLQ3ZCN5 2332 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 MEX3AA1L020 520 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 TLCD2A6NGC4 264 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 TSPAN2O60636 221 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 LRP3O75074 770 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 EIF3GO75821 320 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKN-204ENST00000366896 CD74P04233 296 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 SPARCP09486 303 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 RIDAP52758 137 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 INSM1Q01101 510 aaPredicted RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 ELAVL1Q15717 326 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 ACKR1Q16570 336 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 UNQ6126/PRO20091Q6UXV3 157 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 INO80EQ8NBZ0 244 aaPredicted RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 OR6S1Q8NH40 331 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 RXFP4Q8TDU9 374 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 SLC41A2Q96JW4 573 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms