RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 TOMM34Q15785 309 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SFRP5Q5T4F7 317 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DEGS2Q6QHC5 323 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR1S2Q8NGQ3 325 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SPTSSAQ969W0 71 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 CMSS1Q9BQ75 279 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 NICN1Q9BSH3 213 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 BET1LQ9NYM9 111 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 IL17BQ9UHF5 180 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 BCL2L11O43521 198 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 HLA-DQB1P01920 261 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SERPINE2P07093 398 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC6A1P30531 599 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 CARD18P57730 90 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR7A5Q15622 319 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ADGRE4PQ86SQ3 457 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF761Q86XN6 746 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC22A24Q8N4F4 322 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR2G3Q8NGZ4 309 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PARP12Q9H0J9 701 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 KCNG2Q9UJ96 466 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SF3B6Q9Y3B4 125 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RFPL4AA6NLU0 287 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RFPL4AL1F8VTS6 287 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TRAF3IP2O43734 574 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SUMO3P55854 103 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RPUSD3Q6P087 351 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR13D1Q8NGV5 346 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ST8SIA1Q92185 356 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DNAJA3Q96EY1 480 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 MAP3K3Q99759 626 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RSRP1Q9BUV0 290 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DNAJB12Q9NXW2 375 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 MPDZO75970 2070 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DOCK11Q5JSL3 2073 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SEC14L6B5MCN3 397 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 XRCC3O43542 346 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TBXA2RP21731 343 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 POU3F4P49335 361 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF79Q15937 498 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 MEP1BQ16820 701 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 STAC2Q6ZMT1 411 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 FAM3DQ96BQ1 224 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RHOFQ9HBH0 211 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF346Q9UL40 294 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PATJQ8NI35 1801 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SPTY2D1-AS1A0A0U1RR47 76 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 H7BYZ3 331 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 IGHG1P01857 330 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 JMJD7P0C870 316 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SMIM10L1P0DMW3 83 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ST6GAL1P15907 406 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TBPP20226 339 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRSS45Q7RTY3 260 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DND1Q8IYX4 353 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 GABRG1Q8N1C3 465 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR52I2Q8NH67 350 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR14L1PQ8NHC6 308 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SMIM10Q96HG1 83 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 AKR1E2Q96JD6 320 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 NPAS1Q99742 590 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 AK3Q9UIJ7 227 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 NXT1Q9UKK6 140 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZC3H12DA2A288 527 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 G3V3Q6 166 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RNASEK-C17orf49H0YIS7 233 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PLGP00747 810 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 IGHEP01854 428 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 C1QCP02747 245 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OMGP23515 440 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 EMDP50402 254 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PPP2CBP62714 309 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PPP2CAP67775 309 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF85Q03923 595 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR2A2Q6IF42 318 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RABEPKQ7Z6M1 372 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMED6Q8WW62 240 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PELI1Q96FA3 418 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR52A1Q9UKL2 312 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 CEBPZOSA8MTT3 80 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RAD1O60671 282 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 NTF3P20783 257 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 EIF1P41567 113 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 BAXQ07812 192 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 ETFDHQ16134 617 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 HAGHQ16775 308 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 FBXW12Q6X9E4 464 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TSEN54Q7Z6J9 526 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRR22Q8IZ63 422 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 CMTM4Q8IZR5 234 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SPICQ8N5J4 248 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR1J2Q8NGS2 313 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SCARF2Q96GP6 870 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 SGCZQ96LD1 299 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 CABLES2Q9BTV7 478 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TPSD1Q9BZJ3 242 aa4.86□□□□□ -1.63
CDC42BPA-204ENST00000366767 TXNIPQ9H3M7 391 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms