RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SLC37A3Q8NCC5 494 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR52L1Q8NGH7 329 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR4Q3Q8NH05 313 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ST7LQ8TDW4 575 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DVL3Q92997 716 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PITX2Q99697 317 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CDADC1Q9BWV3 514 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DGCR6LQ9BY27 220 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 WDR76Q9H967 626 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TMEM165Q9HC07 324 aa11.48□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NBEAL1Q6ZS30 2694 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ACOT8O14734 319 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 WNT2P09544 360 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SELEP16581 610 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF12P17014 697 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ADRA2CP18825 462 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CALB2P22676 271 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CPT2P23786 658 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PYCR1P32322 319 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MDH2P40926 338 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TEX30Q5JUR7 227 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2T5Q6IEZ7 315 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LYPD4Q6UWN0 246 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CD300LDQ6UXZ3 194 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF771Q7L3S4 317 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DHFR2Q86XF0 187 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 KLHL36Q8N4N3 616 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 AQP11Q8NBQ7 271 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2T4Q8NH00 348 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 OR2T29Q8NH02 315 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 NANPQ8TBE9 248 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 POP5Q969H6 163 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 C1orf21Q9H246 121 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TMEM100Q9NV29 134 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TAS2R1Q9NYW7 299 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PCDHB10Q9UN67 800 aa11.47□□□□□ -0.57
TNFRSF1A-202ENST00000366159 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TVP23AA6NH52 213 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 F5H5P2 479 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 HLA-DQA2P01906 255 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 HLA-DPB1P04440 258 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF823P16415 610 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 CD200P41217 278 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SRP9P49458 86 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLC25A1P53007 311 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 RAD23AP54725 363 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TPTEP56180 551 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PRSS12P56730 875 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF154Q13106 437 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 LINC01590Q5TEZ4 76 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 MUC20Q8N307 709 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 BHLHE23Q8NDY6 225 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PROKR2Q8NFJ6 384 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 Q8TCH9 128 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 SLCO4A1Q96BD0 722 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 ASB9Q96DX5 294 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 TSSK6Q9BXA6 273 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 HCAR1Q9BXC0 346 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 PRPF19Q9UMS4 504 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 BAIAP2Q9UQB8 552 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 INSIG2Q9Y5U4 225 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 COMMD3-BMI1R4GMX3 469 aa11.46□□□□□ -0.57
TNFRSF1A-202ENST00000366159 M0R135 149 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PTBP3O95758 552 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CYB5R3P00387 301 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 LCATP04180 440 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SPI1P17947 270 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 COMPP49747 757 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF92Q03936 586 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CRMP1Q14194 572 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GK3PQ14409 553 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SNAI3Q3KNW1 292 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 KLF17Q5JT82 389 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 DRAM2Q6UX65 266 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 DCXRQ7Z4W1 244 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MOGAT3Q86VF5 341 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR51L1Q8NGJ5 315 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR9Q1Q8NGQ5 310 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM216AQ8WUB2 273 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF799Q96GE5 643 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ESM1Q9NQ30 184 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TBC1D23Q9NUY8 699 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 LRCH1Q9Y2L9 728 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 U3KQV3 271 aa11.45□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GYPBP06028 91 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RAP2AP10114 183 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CLUP10909 449 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ENTPD1P49961 510 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms