RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 METTL12A8MUP2 240 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 AQP8O94778 261 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CTLA4P16410 223 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 DRD1P21728 446 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 ENPP1P22413 925 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SRYQ05066 204 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 IL10RAQ13651 578 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SPTSSAQ969W0 71 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 GSTZ1O43708 216 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CHRM2P08172 466 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 S100PP25815 95 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 PPICP45877 212 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CD226Q15762 336 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SSX2Q16385 188 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 PGAP1Q75T13 922 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
COL6A1-201ENST00000361866 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 B3GALT5Q9Y2C3 310 aa12.53□□□□□ -0.4
COL6A1-201ENST00000361866 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 CACNA1EQ15878 2313 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 MOSPD3O75425 235 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 RPA2P15927 270 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 CHATP28329 748 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 HSF1Q00613 529 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 SLC30A7Q8NEW0 376 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 NUBPLQ8TB37 319 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 NT5CQ8TCD5 201 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 NUDT9Q9BW91 350 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 RARRES3Q9UL19 164 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 DTX4Q9Y2E6 619 aa12.52□□□□□ -0.4
COL6A1-201ENST00000361866 CD38P28907 300 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 CASRP41180 1078 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 DCAF7P61962 342 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 TAF9Q16594 264 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 OR1S1Q8NH92 325 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 TSPAN32Q96QS1 320 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF2Q9BSG1 426 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-201ENST00000361866 CTSFQ9UBX1 484 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF175Q9Y473 711 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 TDRD6O60522 2096 aaKnown RBP12.52□□□□□ -0.41
COL6A1-201ENST00000361866 SBF1O95248 1867 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 FAM74A7A6NL05 159 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 MT-ATP6P00846 226 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 SERPINE2P07093 398 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 KIAA0141Q14154 515 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-201ENST00000361866 SP6Q3SY56 376 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 FAM74A3Q4VXF1 159 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-201ENST00000361866 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 HAS2Q92819 552 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 TXNIPQ9H3M7 391 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 C12orf10Q9HB07 376 aa12.52□□□□□ -0.41
COL6A1-201ENST00000361866 CXorf51AA0A1B0GTR3 108 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 OR4C45A6NMZ5 311 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 H7C1Q1 480 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 CELA2BP08218 269 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 PEBP1P30086 187 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 CDAP32320 146 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 MFAP5Q13361 173 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TOMM34Q15785 309 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 EMC4Q5J8M3 183 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM229BQ8NBD8 167 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 OR9K2Q8NGE7 335 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TERB2Q8NHR7 220 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TGIF2Q9GZN2 237 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 KLHDC2Q9Y2U9 406 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 R4GMQ9 66 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 PIN1P1O15428 100 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 THY1P04216 161 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 C17orf67Q0P5P2 114 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 KCNE5Q9UJ90 142 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 CTDSPLO15194 276 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 ASCL1P50553 236 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 EIF2S3LQ2VIR3 472 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM255AQ5JRV8 349 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 EXD3Q8N9H8 876 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 OR14L1PQ8NHC6 308 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 SNIP1Q8TAD8 396 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 CMTM3Q96MX0 182 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 NDRG3Q9UGV2 375 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms