RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SFTA3P0C7M3 94 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 CYHR1Q6ZMK1 362 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 C11orf40Q8WZ69 217 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 ING1Q9UK53 422 aaPredicted RBP14.59□□□□□ -0.07
COL18A1-203ENST00000359759 NUDT19A8MXV4 375 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 H3BP45 60 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 NRASP01111 189 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
COL18A1-203ENST00000359759 SLC39A13Q96H72 371 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 HINT3Q9NQE9 182 aaKnown RBP14.59□□□□□ -0.07
COL18A1-203ENST00000359759 SMIM17P0DL12 118 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 HOXC13P31276 330 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 BPIFB3P59826 476 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM267Q0VDI3 215 aaPredicted RBP14.59□□□□□ -0.07
COL18A1-203ENST00000359759 RNASEKQ6P5S7 137 aaKnown RBP14.59□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM207Q6UWW9 146 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 ZFPM2Q8WW38 1151 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 TMEM230Q96A57 120 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 EGLN1Q9GZT9 426 aa14.59□□□□□ -0.07
COL18A1-203ENST00000359759 XKRY2A2RUG3 117 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 HEXAP06865 529 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 PTBP1P26599 531 aaKnown RBP eCLIP14.58□□□□□ -0.072e-6■■■■□ 20.4
COL18A1-203ENST00000359759 YPEL5P62699 121 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 RAB1AP62820 205 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 OR13H1Q8NG92 308 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 PHYHIPQ92561 330 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 PRO1933Q9H354 126 aa14.58□□□□□ -0.07
COL18A1-203ENST00000359759 ESRP2Q9H6T0 727 aaKnown RBP14.58□□□□□ -0.07
COL18A1-203ENST00000359759 LIN7CQ9NUP9 197 aaKnown RBP14.58□□□□□ -0.07
COL18A1-203ENST00000359759 YTHDF2Q9Y5A9 579 aaKnown RBP14.58□□□□□ -0.07
COL18A1-203ENST00000359759 SELEP16581 610 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 GUCA2AQ02747 115 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ADAMTSL4Q6UY14 1074 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ACY3Q96HD9 319 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 PLEKHB1Q9UF11 243 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-203ENST00000359759 SLC22A13Q9Y226 551 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 NALCNQ8IZF0 1738 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 SPRY1O43609 319 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-203ENST00000359759 CD37P11049 281 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 DCTDP32321 178 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ISL1P61371 349 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 UCN3Q969E3 161 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 OCEL1Q9H607 264 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ARRB2P32121 409 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
COL18A1-203ENST00000359759 CLDN20P56880 219 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 TOMM20LQ6UXN7 152 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 DLEU7Q6UYE1 221 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 PDXPQ96GD0 296 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 MYH9P35579 1960 aaKnown RBP14.58□□□□□ -0.08
COL18A1-203ENST00000359759 RPL7P18124 248 aaKnown RBP14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ETFDHQ16134 617 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 ZNF561Q8N587 486 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 CLEC5AQ9NY25 188 aa14.58□□□□□ -0.08
COL18A1-203ENST00000359759 APOBEC1P41238 236 aaKnown RBP14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MOGAT2Q3SYC2 334 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 ZADH2Q8N4Q0 377 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 CORO2AQ92828 525 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 ICOSLGO75144 302 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 ONECUT2O95948 504 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 PAQR9Q6ZVX9 377 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 CXCL16Q9H2A7 254 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MSL2Q9HCI7 577 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MBNL1Q9NR56 388 aaKnown RBP14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MMACHCQ9Y4U1 282 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 TMEM129A0AVI4 362 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 SDHAP31040 664 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MFRPQ9BY79 579 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 FBXO4Q9UKT5 387 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MRPS2Q9Y399 296 aaKnown RBP14.57□□□□□ -0.08
COL18A1-203ENST00000359759 EMDP50402 254 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 MRPS21P82921 87 aaKnown RBP14.57□□□□□ -0.08
COL18A1-203ENST00000359759 WDR89Q96FK6 387 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-203ENST00000359759 HCFC2Q9Y5Z7 792 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 CTXN2P0C2S0 81 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 HOXC8P31273 242 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 A0A1B0GX78 115 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 COX5AP20674 150 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 FA2HQ7L5A8 372 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 PPP1R1CQ8WVI7 109 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 TIMD4Q96H15 378 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 TOLLIPQ9H0E2 274 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
COL18A1-203ENST00000359759 A0A1B0GTW7 788 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 HOXC11O43248 304 aaPredicted RBP14.56□□□□□ -0.08
COL18A1-203ENST00000359759 GYPAP02724 150 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 ACSM4P0C7M7 580 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 C2orf50Q96LR7 162 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 PBOV1Q9GZY1 135 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 SLCO2B1O94956 709 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 LYG2Q86SG7 212 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 SCPEP1Q9HB40 452 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 TLCD2A6NGC4 264 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 HAAOP46952 286 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 ACSM6Q6P461 480 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 PLPPR2Q96GM1 343 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 MED19A0JLT2 244 aaPredicted RBP14.56□□□□□ -0.08
COL18A1-203ENST00000359759 WFDC8Q8IUA0 241 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 KLHDC1Q8N7A1 406 aa14.56□□□□□ -0.08
COL18A1-203ENST00000359759 C8orf44Q96CB5 159 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms