RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TAAR6Q96RI8 345 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF195O14628 629 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 GP2P55259 537 aaKnown RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 OR2AK2Q8NG84 335 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 NUDCD2Q8WVJ2 157 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 DHRS9Q9BPW9 319 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 SCPEP1Q9HB40 452 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 CMC2Q9NRP2 79 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 ALX3O95076 343 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 C4orf17Q53FE4 359 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 DMRTC1Q5HYR2 192 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 CCL4L1Q8NHW4 92 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 GAR1Q9NY12 217 aaKnown RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 LOXL2Q9Y4K0 774 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF727A8MUV8 499 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 GPX5O75715 221 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 SELENBP1Q13228 472 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 GPR32P1Q8NGA4 272 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 ASB16Q96NS5 453 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 SARGQ9BW04 601 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 STRAPQ9Y3F4 350 aaKnown RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 R4GMQ9 66 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 TNFRSF10CO14798 259 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 SPRY1O43609 319 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 COX7A2P2O60397 106 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 FGF7P21781 194 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 HTRA4P83105 476 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 EGR3Q06889 387 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 MORN4Q8NDC4 146 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 BAHD1Q8TBE0 780 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-202ENST00000359082 SLC39A7Q92504 469 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 TMEM230Q96A57 120 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 MAGT1Q9H0U3 335 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 PRSS44E7EML9 344 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 TMPRSS11DO60235 418 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 JTBO76095 146 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 OR2F2O95006 317 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 TNFSF15O95150 251 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 RPL12P30050 165 aaKnown RBP16.67■□□□□ 0.26
SHANK1-202ENST00000359082 OR2F1Q13607 317 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 CADM3Q8N126 398 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 MZB1Q8WU39 189 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 FAM96BQ9Y3D0 163 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 POM121BA6NF01 834 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 CXCL13O43927 109 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 CD80P33681 288 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 RCL1Q9Y2P8 373 aaKnown RBP16.67■□□□□ 0.26
SHANK1-202ENST00000359082 TRGV8A0A0C4DH27 118 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 DBX1A6NMT0 343 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 SOX18P35713 384 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 ISG20L2Q9H9L3 353 aaKnown RBP16.67■□□□□ 0.26
SHANK1-202ENST00000359082 PRSS37A4D1T9 235 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 CPN1P15169 458 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 S1PR3Q99500 378 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 SLC22A13Q9Y226 551 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 G3V3Q6 166 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 C17orf107Q6ZR85 190 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 M1APQ8TC57 530 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 RXFP4Q8TDU9 374 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 GNPNAT1Q96EK6 184 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-202ENST00000359082 COMMD5Q9GZQ3 224 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 SLC2A8Q9NY64 477 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF629Q9UEG4 869 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-202ENST00000359082 MYH4Q9Y623 1939 aa16.67■□□□□ 0.26
SHANK1-202ENST00000359082 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 XRCC2O43543 280 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ARNTP27540 789 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 IKZF5Q9H5V7 419 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 DLL4Q9NR61 685 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ST6GAL1P15907 406 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 SPATA46Q5T0L3 261 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 TIAM2Q8IVF5 1701 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 SH2D7A6NKC9 451 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-202ENST00000359082 DSCR3O14972 297 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 HOXC11O43248 304 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-202ENST00000359082 C1QBP02746 253 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ADRB1P08588 477 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 PTTG1IPP53801 180 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ARIH2OSQ8N7S6 290 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ERGIC1Q969X5 290 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ING1Q9UK53 422 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-202ENST00000359082 PRRT4C9JH25 899 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
SHANK1-202ENST00000359082 H3F3AP84243 136 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 Q1RN00 199 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 ACOT7LQ6ZUV0 252 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 GABARAPL1Q9H0R8 117 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 LTB4R2Q9NPC1 389 aa16.66■□□□□ 0.26
SHANK1-202ENST00000359082 PIAS2O75928 621 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 SMIM18P0DKX4 95 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 B4GALT1P15291 398 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 CDAP32320 146 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 PIGPP57054 158 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ANKRD34AQ69YU3 496 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 MARCH1Q8TCQ1 289 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 FBXO4Q9UKT5 387 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 MMP17Q9ULZ9 603 aa16.65■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF354AO60765 605 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms