RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 COLCA1Q6ZS62 124 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 KCTD20Q7Z5Y7 419 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 KBTBD8Q8NFY9 601 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 RADILQ96JH8 1075 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 G6PC2Q9NQR9 355 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 SLC22A13Q9Y226 551 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 SNX5Q9Y5X3 404 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 MRPS14O60783 128 aaKnown RBP21.9■■□□□ 1.1
SSBP3-202ENST00000357475 LCATP04180 440 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 TACSTD2P09758 323 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 ATP6V1B1P15313 513 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 DCTDP32321 178 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 MED22Q15528 200 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 TBCEQ15813 527 aaPredicted RBP21.9■■□□□ 1.1
SSBP3-202ENST00000357475 CRYBG3Q68DQ2 2970 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 ABHD4Q8TB40 342 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 MRPL48Q96GC5 212 aaKnown RBP21.9■■□□□ 1.1
SSBP3-202ENST00000357475 C1QTNF5Q9BXJ0 243 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 NIPAL2Q9H841 368 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 GTF2A1LQ9UNN4 478 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 STARD10Q9Y365 291 aa21.9■■□□□ 1.1
SSBP3-202ENST00000357475 SHISA9B4DS77 424 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 LOC110117498-PIK3R3F6TDL0 507 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 GPRIN2O60269 458 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 KIR3DL2P43630 455 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 PRSS12P56730 875 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 WDR38Q5JTN6 314 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 SLC22A25Q6T423 547 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 CATSPERDQ86XM0 798 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 IL17RDQ8NFM7 739 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 OR8B12Q8NGG6 310 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 DCLRE1CQ96SD1 692 aaKnown RBP21.89■■□□□ 1.09
SSBP3-202ENST00000357475 BABAM2Q9NXR7 383 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 FRRS1LQ9P0K9 344 aa21.89■■□□□ 1.09
SSBP3-202ENST00000357475 CD3EP07766 207 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 MMP16P51512 607 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 UCP2P55851 309 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 SPHARQ15513 63 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 MSMPQ1L6U9 139 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 ZNF829Q3KNS6 432 aaPredicted RBP21.88■■□□□ 1.09
SSBP3-202ENST00000357475 SPATA46Q5T0L3 261 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 OR2G2Q8NGZ5 317 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 OR2AE1Q8NHA4 323 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 KCNS3Q9BQ31 491 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 PBOV1Q9GZY1 135 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 ST6GALNAC2Q9UJ37 374 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 PLCE1Q9P212 2302 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 ABCA4P78363 2273 aa21.88■■□□□ 1.09
SSBP3-202ENST00000357475 ROS1P08922 2347 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 PNMA8CA0A1B0GUJ8 204 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 A0A1W2PPR1 153 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 ICMTO60725 284 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 NR4A1P22736 598 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 GBX2P52951 348 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-202ENST00000357475 SNTB2Q13425 540 aaKnown RBP21.87■■□□□ 1.09
SSBP3-202ENST00000357475 DAZAP2Q15038 168 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-202ENST00000357475 ODF4Q2M2E3 257 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 KCTD8Q6ZWB6 473 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 LILRB1Q8NHL6 650 aaPredicted RBP21.87■■□□□ 1.09
SSBP3-202ENST00000357475 SOX7Q9BT81 388 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 EIF3KQ9UBQ5 218 aaKnown RBP21.87■■□□□ 1.09
SSBP3-202ENST00000357475 OR52A1Q9UKL2 312 aa21.87■■□□□ 1.09
SSBP3-202ENST00000357475 TBX1O43435 398 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 TTRP02766 147 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 PCSK6P29122 969 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 NKX6-1P78426 367 aaPredicted RBP21.86■■□□□ 1.09
SSBP3-202ENST00000357475 GLYATL3Q5SZD4 288 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 HIST2H2BCQ6DN03 193 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 SVOPQ8N4V2 548 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 PGAM5Q96HS1 289 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 TMEM204Q9BSN7 226 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 TBCCD1Q9NVR7 557 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 KCNN3Q9UGI6 736 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 RNF115Q9Y4L5 304 aa21.86■■□□□ 1.09
SSBP3-202ENST00000357475 A0A087WXM4 84 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 TRIM64CA6NLI5 447 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 A6NNC1 897 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 H3BSH0 61 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 INMTO95050 263 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 NEDD8Q15843 81 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 GFOD2Q3B7J2 385 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 TMEM255AQ5JRV8 349 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 FDX2Q6P4F2 183 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 VHLLQ6RSH7 139 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 OR1J1Q8NGS3 322 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 APOBEC3DQ96AK3 386 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-202ENST00000357475 LYZL4Q96KX0 146 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 MYCBPQ99417 103 aaPredicted RBP21.85■■□□□ 1.09
SSBP3-202ENST00000357475 PTTG3PQ9NZH4 202 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 NUFIP1Q9UHK0 495 aaKnown RBP21.85■■□□□ 1.09
SSBP3-202ENST00000357475 FZR1Q9UM11 496 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 ATP23Q9Y6H3 246 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 LRBAP50851 2863 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 MAGEA13PA6NCF6 341 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 APOC1P02654 83 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 HSMCR30P0CW71 290 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 NR1H2P55055 460 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 PPP1CBP62140 327 aa21.85■■□□□ 1.09
SSBP3-202ENST00000357475 ALKBH1Q13686 389 aaKnown RBP21.85■■□□□ 1.09
SSBP3-202ENST00000357475 HLXQ14774 488 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms