RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NKX3-1Q99801 234 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 ATF6BQ99941 703 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PDCD1LG2Q9BQ51 273 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PPIL3Q9H2H8 161 aaKnown RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 C1orf198Q9H425 327 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 G6PC2Q9NQR9 355 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 FAM206AQ9NX38 181 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 SCN3BQ9NY72 215 aa3.47□□□□□ -1.85
LIG4-201ENST00000356922 PLEKHB1Q9UF11 243 aaPredicted RBP3.47□□□□□ -1.85
LIG4-201ENST00000356922 IGHV3-64DA0A0J9YX35 117 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 TMEM129A0AVI4 362 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 DAPL1A0PJW8 107 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 MPZL2O60487 215 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 INMTO95050 263 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 CCDC159P0C7I6 412 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 SMIM18P0DKX4 95 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 SELEP16581 610 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 KIR3DL2P43630 455 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 HSPA13P48723 471 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 SH3BGRP55822 239 aaPredicted RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 ZNF121P58317 390 aaPredicted RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 NKX6-1P78426 367 aaPredicted RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 DYNC1I2Q13409 638 aaKnown RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 MST1LQ2TV78 715 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 GFOD2Q3B7J2 385 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 SLC36A2Q495M3 483 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 CDONQ4KMG0 1287 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 NCMAPQ5T1S8 102 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 ASPHD2Q6ICH7 369 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 KLBQ86Z14 1044 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 TGIF2LYQ8IUE0 185 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 ZNF679Q8IYX0 411 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 NANOGP1Q8N7R0 232 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 RGP1Q92546 391 aaPredicted RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 SGK3Q96BR1 496 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 TMEM80Q96HE8 168 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 ALG8Q9BVK2 526 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 OR2J1Q9GZK6 312 aa3.46□□□□□ -1.85
LIG4-201ENST00000356922 DIMT1Q9UNQ2 313 aaKnown RBP3.46□□□□□ -1.85
LIG4-201ENST00000356922 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 IQCMA0A1B0GVH7 501 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 CTAG2O75638 210 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 UBL3O95164 117 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 FADS2O95864 444 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 CD8AP01732 235 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 COX6B1P14854 86 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ACKR3P25106 362 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 HSD11B1P28845 292 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 FABP6P51161 128 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 UCP2P55851 309 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SORDQ00796 357 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ZNF92Q03936 586 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SYT9Q86SS6 491 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 TMEM200AQ86VY9 491 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 STX19Q8N4C7 294 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 C17orf78Q8N4C9 275 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 TMEM171Q8WVE6 324 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 TRMT61AQ96FX7 289 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 C4orf45Q96LM5 186 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 DACH2Q96NX9 599 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 GNG8Q9UK08 70 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 PAIP2BQ9ULR5 123 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 LRCH1Q9Y2L9 728 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 CSPG4Q6UVK1 2322 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 A0A1B0GTI1 187 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 M0R135 149 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 DSCAMO60469 2012 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SMPD2O60906 423 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 NDUFS7O75251 213 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ZFPL1O95159 310 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 TTRP02766 147 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SOD3P08294 240 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ATP6V1B1P15313 513 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 MYL12AP19105 171 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 DCKP27707 260 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 APLNRP35414 380 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 THBS4P35443 961 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ARR3P36575 388 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 CHN2P52757 468 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 GP2P55259 537 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 RPS11P62280 158 aaKnown RBP eCLIP3.46□□□□□ -1.86
LIG4-201ENST00000356922 GK2Q14410 553 aaPredicted RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 WDR38Q5JTN6 314 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 LCN1P1Q5VSP4 162 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SLC22A25Q6T423 547 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 FAM57BQ71RH2 274 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 P2RY8Q86VZ1 359 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 OR8B12Q8NGG6 310 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 SNX33Q8WV41 574 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ZNF799Q96GE5 643 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 TMEM204Q9BSN7 226 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 CDCA4Q9BXL8 241 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 CDH20Q9HBT6 801 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 ACOT13Q9NPJ3 140 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 EIF3KQ9UBQ5 218 aaKnown RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 ST6GALNAC2Q9UJ37 374 aa3.46□□□□□ -1.86
LIG4-201ENST00000356922 KLF2Q9Y5W3 355 aaPredicted RBP3.46□□□□□ -1.86
LIG4-201ENST00000356922 TMEM269A0A1B0GVZ9 245 aa3.45□□□□□ -1.86
LIG4-201ENST00000356922 A6NNC1 897 aa3.45□□□□□ -1.86
LIG4-201ENST00000356922 LY6HO94772 140 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms