RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 FAM109BQ6ICB4 259 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 KCTD18Q6PI47 426 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 COMMD2Q86X83 199 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM104Q8NE00 496 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 OR5D18Q8NGL1 313 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 OR4K15Q8NH41 348 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 EDAQ92838 391 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 OR10C1Q96KK4 312 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 NRIP2Q9BQI9 281 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 NUDT22Q9BRQ3 303 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 UQCC2Q9BRT2 126 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 METTL8Q9H825 291 aaKnown RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SLCO1B1Q9Y6L6 691 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 LTBP2Q14767 1821 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 IGLV1-36A0A0B4J1U3 117 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 METTL21EPA6NDL7 271 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 FGF16O43320 207 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SSX5O60225 188 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF217O75362 1048 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 APOC1P02654 83 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 CLPSP04118 112 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 NR0B1P51843 470 aaKnown RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 RPL27P61353 136 aaKnown RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 RAB32Q13637 225 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 FNDC7Q5VTL7 733 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 LPCAT3Q6P1A2 487 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 DRAM2Q6UX65 266 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM151BQ8IW70 566 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 SLC26A10Q8NG04 563 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 OR52N5Q8NH56 324 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 AQP3Q92482 292 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM41AQ96HV5 264 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 AKR1E2Q96JD6 320 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 NAA11Q9BSU3 229 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-203ENST00000356147 PCDHGA1Q9Y5H4 931 aa9.05□□□□□ -0.96
PTPRA-203ENST00000356147 PHF3Q92576 2039 aaKnown RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 LDLRAD4O15165 306 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SOCS1O15524 211 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM127O75204 238 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 MPIG6BO95866 241 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 BGLAPP02818 100 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 CD79AP11912 226 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 ABOP16442 354 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 NTSR1P30989 418 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 AWAT2Q6E213 333 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 ANGPTL5Q86XS5 388 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 PNLDC1Q8NA58 520 aaKnown RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 NPRL2Q8WTW4 380 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 NIT2Q9NQR4 276 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SLC17A5Q9NRA2 495 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SHISA8B8ZZ34 492 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF354AO60765 605 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF205O95201 554 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 KNG1P01042 644 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 BCKDHBP21953 392 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 RIPPLY1Q0D2K3 151 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 PJVKQ0ZLH3 352 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 FUT7Q11130 342 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 HABP2Q14520 560 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 MEF2DQ14814 521 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 MICBQ29980 383 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
PTPRA-203ENST00000356147 FAM209BQ5JX69 171 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 LCN10Q6JVE6 187 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SHISA6Q6ZSJ9 500 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SLC22A18ASQ8N1D0 253 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 SPSB2Q99619 263 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 IL23AQ9NPF7 189 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 C2orf16Q68DN1 1984 aa9.04□□□□□ -0.96
PTPRA-203ENST00000356147 TEX13DA0A0J9YY54 714 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 TXNL1O43396 289 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 IL2RAP01589 272 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 GLI4P10075 376 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 ZNF823P16415 610 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 GLRA1P23415 457 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 CPT2P23786 658 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 EMP2P54851 167 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 DCDP81605 110 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SSBP1Q04837 148 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 ANKRD55Q3KP44 614 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 EMC4Q5J8M3 183 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 OR2A2Q6IF42 318 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 C19orf47Q8N9M1 422 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 THAP3Q8WTV1 239 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 ST6GALNAC5Q9BVH7 336 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 G6PC2Q9NQR9 355 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SLC2A4RGQ9NR83 387 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SOHLH2Q9NX45 425 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 RCC2Q9P258 522 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 RPH3AQ9Y2J0 694 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms