RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FGF9P31371 208 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ATP1B3P54709 279 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 OGFOD3Q6PK18 319 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 CXorf51AA0A1B0GTR3 108 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 CBY3A6NI87 242 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 C4orf47A7E2U8 309 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 PHYHO14832 338 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 KCNAB3O43448 404 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 GNB3P16520 340 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 MLC1Q15049 377 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ETFDHQ16134 617 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 ANGPTL5Q86XS5 388 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 MR1Q95460 341 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 C8orf44Q96CB5 159 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 TCTN2Q96GX1 697 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 SHDQ96IW2 340 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
SREBF1-202ENST00000355815 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 TMEM212A6NML5 194 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 MMP15P51511 669 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 ZNF600Q6ZNG1 722 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 RBMXL1Q96E39 390 aaKnown RBP12.71□□□□□ -0.37
SREBF1-202ENST00000355815 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 OR5B2Q96R09 309 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 FLRT3Q9NZU0 649 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 MMP17Q9ULZ9 603 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 C2CD4DB7Z1M9 353 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 SHOXO15266 292 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 FCGR2CP31995 323 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 LPAR4Q99677 370 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.37
SREBF1-202ENST00000355815 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 TNFRSF10CO14798 259 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 CD37P11049 281 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 GABRA1P14867 456 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 TMEM201Q5SNT2 666 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 STAC2Q6ZMT1 411 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 OR14A16Q8NHC5 309 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 RXFP4Q8TDU9 374 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 SECTM1Q8WVN6 248 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 PELI1Q96FA3 418 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 WWTR1Q9GZV5 400 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF749O43361 778 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 ICOSLGO75144 302 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 LCATP04180 440 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 CAMK2DQ13557 499 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 FAM53BQ14153 422 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 ETFRF1Q6IPR1 90 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 C17orf78Q8N4C9 275 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 OR2G3Q8NGZ4 309 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 TMEM234Q8WY98 164 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 STACQ99469 402 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 TXN2Q99757 166 aa12.71□□□□□ -0.38
SREBF1-202ENST00000355815 ELF5Q9UKW6 265 aaPredicted RBP12.71□□□□□ -0.38
SREBF1-202ENST00000355815 C17orf51A8MQB3 221 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 SNRPGP15A8MWD9 76 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 OR7C1O76099 320 aaPredicted RBP12.7□□□□□ -0.38
SREBF1-202ENST00000355815 EPPINO95925 133 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 NFYBP25208 207 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 LIMS1P48059 325 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 RPL18Q07020 188 aaKnown RBP12.7□□□□□ -0.38
SREBF1-202ENST00000355815 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF321PQ8N8H1 164 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 MITD1Q8WV92 249 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
SREBF1-202ENST00000355815 KTI12Q96EK9 354 aaPredicted RBP12.7□□□□□ -0.38
SREBF1-202ENST00000355815 KCNK15Q9H427 330 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 SPTY2D1-AS1A0A0U1RR47 76 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF587BE7ETH6 402 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 ADAM10O14672 748 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 TBX19O60806 448 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 RECKO95980 971 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 PSG6Q00889 435 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 OVCH1Q7RTY7 1134 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 LCORQ96JN0 433 aaPredicted RBP12.7□□□□□ -0.38
SREBF1-202ENST00000355815 MOGAT1Q96PD6 335 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 LRRC61Q9BV99 259 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 WDR76Q9H967 626 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 ZNF160Q9HCG1 818 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 ANKRD10Q9NXR5 420 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 NBASA2RRP1 2371 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
SREBF1-202ENST00000355815 HRH1P35367 487 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms