RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SMIM11AP58511 58 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 RPS18P62269 152 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 MRPS10P82664 201 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 BEST3Q8N1M1 668 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 OR10H4Q8NGA5 316 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ISYNA1Q9NPH2 558 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 KRCC1Q9NPI7 259 aaPredicted RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 METTL1Q9UBP6 276 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 EXPH5Q8NEV8 1989 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 LOC101059948A0A1B0GTJ6 334 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 C9orf170A2RU37 121 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 CDC14CA4D256 554 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ZNF705GA8MUZ8 300 aaPredicted RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ADAM10O14672 748 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 FRS3O43559 492 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ZNF354AO60765 605 aaPredicted RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 THY1P04216 161 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 H1F0P07305 194 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ACKR3P25106 362 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ELAVL4P26378 380 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ACAA2P42765 397 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 DLX5P56178 289 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 PLCXD2Q0VAA5 305 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 NDUFAF6Q330K2 333 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 SLC22A10Q63ZE4 541 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 BAIAP2L2Q6UXY1 529 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 KRT77Q7Z794 578 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 CMTM4Q8IZR5 234 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 OR2G2Q8NGZ5 317 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ADAMTS17Q8TE56 1095 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 NKD1Q969G9 470 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 PNPLA2Q96AD5 504 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 ARSGQ96EG1 525 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 MOGAT1Q96PD6 335 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 GPN1Q9HCN4 374 aaPredicted RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 SMCO4Q9NRQ5 59 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 MYOTQ9UBF9 498 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 TESQ9UGI8 421 aaKnown RBP9.04□□□□□ -0.96
SYNE1-203ENST00000354674 SLC35A3Q9Y2D2 325 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 NPFFR2Q9Y5X5 522 aa9.04□□□□□ -0.96
SYNE1-203ENST00000354674 TMEM272A0A1B0GTI8 110 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 TSTD3H0UI37 97 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 J3QLW9 94 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 LYPD3O95274 346 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 ZNF19P17023 458 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 DLSTP36957 453 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 NRG3P56975 720 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 RGS8P57771 180 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 SNRPGP62308 76 aaKnown RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 PPA1Q15181 289 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 MPPED2Q15777 294 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 BATFQ16520 125 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 ENTPD8Q5MY95 495 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 FAM69AQ5T7M9 428 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 RHOUQ7L0Q8 258 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 GLB1L2Q8IW92 636 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 ADOQ96SZ5 270 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 TAS2R10Q9NYW0 307 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 EP300Q09472 2414 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 FAAHO00519 579 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 RNF13O43567 381 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 UBBP0CG47 229 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 IL12BP29460 328 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 APLNRP35414 380 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 RNF144AP50876 292 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 ELFN2Q5R3F8 820 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 RANBP3LQ86VV4 465 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 PRR22Q8IZ63 422 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 OR2AK2Q8NG84 335 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 OR6K3Q8NGY3 331 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 NPRL2Q8WTW4 380 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 MCHR1Q99705 422 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 FNDC11Q9BVV2 318 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 SELENOIQ9C0D9 397 aa9.03□□□□□ -0.96
SYNE1-203ENST00000354674 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
SYNE1-203ENST00000354674 NSG1A0A0A6YYJ2 146 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 ALG1L2C9J202 215 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 SC5DO75845 299 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 CALCRP30988 508 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 TNFRSF9Q07011 255 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 IL10RAQ13651 578 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 OR10K2Q6IF99 312 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 RPL13AP3Q6NVV1 102 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 RNF113BQ8IZP6 322 aaKnown RBP9.02□□□□□ -0.96
SYNE1-203ENST00000354674 ZNF559Q9BR84 538 aa9.02□□□□□ -0.96
SYNE1-203ENST00000354674 A0A1B0GUH1 482 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 MARCH11A6NNE9 402 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 RGS9O75916 674 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 SERPINA5P05154 406 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 FBXO45P0C2W1 286 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 GKN3PP0CG01 181 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF84P51523 738 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ST3GAL3Q11203 375 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 RTP5Q14D33 572 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 CD226Q15762 336 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF626Q68DY1 528 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 PODNL1Q6PEZ8 512 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms