RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MAP2K3P46734 347 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 PITPNBP48739 271 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 BIDP55957 195 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 OR2B6P58173 313 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 H3F3AP84243 136 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 EIF2B1Q14232 305 aaKnown RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 P2RY14Q15391 338 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ETFDHQ16134 617 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 HIST3H3Q16695 136 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 WDR38Q5JTN6 314 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 TMEM211Q6ICI0 200 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 MZT2BQ6NZ67 158 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 SLC25A47Q6Q0C1 308 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 STAC2Q6ZMT1 411 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 KRT77Q7Z794 578 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 LRRTM1Q86UE6 522 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 CATSPERDQ86XM0 798 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 WDFY1Q8IWB7 410 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 RDH10Q8IZV5 341 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 PRSS35Q8N3Z0 413 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ZNF676Q8N7Q3 588 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 SAMD12Q8N8I0 201 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 C19orf18Q8NEA5 215 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 IL17RDQ8NFM7 739 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 OR4M1Q8NGD0 313 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ST7LQ8TDW4 575 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 RNF133Q8WVZ7 376 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 HSD17B8Q92506 261 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 TRIM63Q969Q1 353 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 MCHR2Q969V1 340 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 DNAJA3Q96EY1 480 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 SCMH1Q96GD3 660 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 SLC25A44Q96H78 314 aaPredicted RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 RBP7Q96R05 134 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 OR5B2Q96R09 309 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 GFI1Q99684 422 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 PIGQQ9BRB3 760 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ELOVL3Q9HB03 270 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 B3GAT2Q9NPZ5 323 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 ANKRD10Q9NXR5 420 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 DKKL1Q9UK85 242 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 LRP12Q9Y561 859 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 R4GMQ9 66 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 V9GY05 133 aa7.22□□□□□ -1.25
CD44-205ENST00000352818 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
CD44-205ENST00000352818 EML6Q6ZMW3 1958 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 A0A0G2JNJ9 132 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 A0A1B0GTH9 108 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 OR2M5A3KFT3 312 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 SULT2B1O00204 365 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 GSTZ1O43708 216 aaPredicted RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 ZIC3O60481 467 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 SMPD2O60906 423 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 SLC43A1O75387 559 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 ISG15P05161 165 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 CD37P11049 281 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 ACHEP22303 614 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 LAP3P28838 519 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 AGFG1P52594 562 aaKnown RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 CLRN1P58418 232 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 B3GALT5-AS1P59052 145 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 RAC1P63000 192 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 CSNK2A1P68400 391 aaPredicted RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 PITPNAQ00169 270 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 DEFA6Q01524 100 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 FMODQ06828 376 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 TMEM176BQ3YBM2 270 aaPredicted RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 ACER2Q5QJU3 275 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 AGAP6Q5VW22 663 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 FOXL2NBQ6ZUU3 175 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 KDM8Q8N371 416 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 OR10H5Q8NGA6 315 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 RAB40AQ8WXH6 277 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 RFT1Q96AA3 541 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 NAA11Q9BSU3 229 aaPredicted RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 WACQ9BTA9 647 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 OR2B2Q9GZK3 357 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 C11orf54Q9H0W9 315 aaPredicted RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 ABCG5Q9H222 651 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 MOB1AQ9H8S9 216 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 TCF7L1Q9HCS4 588 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 BRD7Q9NPI1 651 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 RBFOX1Q9NWB1 397 aaKnown RBP7.21□□□□□ -1.26
CD44-205ENST00000352818 MED29Q9NX70 200 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 Q9UFV3 132 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 FOXJ3Q9UPW0 622 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 CAMK2AQ9UQM7 478 aa7.21□□□□□ -1.26
CD44-205ENST00000352818 VWFP04275 2813 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 IGKV1D-43A0A0B4J1Z2 117 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 A0A0G2JMP0 313 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 A0A0X1KG70 313 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 A0A1W2PNR3 127 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 LRRC3CA6NJW4 275 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 ZNF814B7Z6K7 855 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 BOLA2-SMG1P6H3BVE0 249 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 LYRM1O43325 122 aa7.2□□□□□ -1.26
CD44-205ENST00000352818 SULT1B1O43704 296 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms