RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 UCNP55089 124 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 RAB35Q15286 201 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 TAF9Q16594 264 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 NRARPQ7Z6K4 114 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 OR1S2Q8NGQ3 325 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 FBXL2Q9UKC9 423 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 PRICKLE3O43900 615 aaPredicted RBP13.95□□□□□ -0.18
PTPRO-202ENST00000348962 CRYBA1P05813 215 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 CD82P27701 267 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 RPS27P42677 84 aaKnown RBP13.95□□□□□ -0.18
PTPRO-202ENST00000348962 ISL1P61371 349 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 CTU2Q2VPK5 515 aaKnown RBP13.95□□□□□ -0.18
PTPRO-202ENST00000348962 TIGD3Q6B0B8 471 aa13.95□□□□□ -0.18
PTPRO-202ENST00000348962 DUSP15Q9H1R2 295 aaPredicted RBP13.95□□□□□ -0.18
PTPRO-202ENST00000348962 DDX60LQ5H9U9 1706 aaKnown RBP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 C21orf140B9A014 251 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 LIPAP38571 399 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 NPBWR1P48145 328 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 RFX2P48378 723 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 ETV1P50549 477 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 AKAP11Q9UKA4 1901 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 SFTPCP11686 197 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 APEHP13798 732 aaKnown RBP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 SRD5A2P31213 254 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 PTOV1Q86YD1 416 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 FAM213BQ8TBF2 198 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 COX14Q96I36 57 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 SARGQ9BW04 601 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 GABARAPL3Q9BY60 117 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 A0A0B4J2A0 478 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 ST8SIA3O43173 380 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 SPRY3O43610 288 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 TBX19O60806 448 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 PTBP1P26599 531 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 LINC01555Q8NAE3 123 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 OR1F12Q8NHA8 337 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 SHPKQ9UHJ6 478 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 TRGV10A0A0A0MS01 117 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 RAB4AP20338 218 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 NKX2-1P43699 371 aaPredicted RBP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 FUT6P51993 359 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 NKX6-1P78426 367 aaPredicted RBP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 IL34Q6ZMJ4 242 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 BHLHA9Q7RTU4 235 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 ESRP2Q9H6T0 727 aaKnown RBP13.94□□□□□ -0.18
PTPRO-202ENST00000348962 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
PTPRO-202ENST00000348962 AGAP14A8MT82 685 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 IGFBP1P08833 259 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF121P58317 390 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 OR8G2PQ6IF36 304 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 WDR74Q6RFH5 385 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 CT55Q8WUE5 264 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ALG1L2C9J202 215 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ALOX5APP20292 161 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ERHP84090 104 aaKnown RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 EBPQ15125 230 aaKnown RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 PP6455Q8WZ26 134 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 TCFL5Q9UL49 500 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ASXL3Q9C0F0 2248 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ZIC2O95409 532 aaPredicted RBP13.93□□□□□ -0.18
PTPRO-202ENST00000348962 HPP00738 406 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF83P51522 516 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 SMIM19Q96E16 107 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 SPACA5Q96QH8 159 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 IKZF5Q9H5V7 419 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 FADS1O60427 444 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 CSN1S1P47710 185 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 OR4C3Q8NH37 302 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 ARPC5LQ9BPX5 153 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 CACFD1Q9UGQ2 172 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 SLC22A13Q9Y226 551 aa13.93□□□□□ -0.18
PTPRO-202ENST00000348962 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 CNR1P21554 472 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 PAQR6Q6TCH4 344 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF793Q6ZN11 406 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 NCCRP1Q6ZVX7 275 aaPredicted RBP13.92□□□□□ -0.18
PTPRO-202ENST00000348962 FJX1Q86VR8 437 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 CDCA4Q9BXL8 241 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 ST3GAL6Q9Y274 331 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 FLVCR1Q9Y5Y0 555 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 PPP3CBP16298 524 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF117Q03924 483 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 SPATA46Q5T0L3 261 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF486Q96H40 463 aaPredicted RBP13.92□□□□□ -0.18
PTPRO-202ENST00000348962 ZNF2Q9BSG1 426 aaPredicted RBP13.92□□□□□ -0.18
PTPRO-202ENST00000348962 BIN3Q9NQY0 253 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 CEP290O15078 2479 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 SPAARA0A1B0GVQ0 90 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 SLC35A2P78381 396 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 CDK5R1Q15078 307 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 AGERQ15109 404 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 LYPD8Q6UX82 237 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 HSD17B11Q8NBQ5 300 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 SLC39A7Q92504 469 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
PTPRO-202ENST00000348962 LAMP3Q9UQV4 416 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms