RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNF136P52737 540 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 EFNA3P52797 238 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 IL11RAQ14626 422 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 ZFP82Q8N141 532 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR4S1Q8NGB4 309 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 MARCH1Q8TCQ1 289 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 NINJ1Q92982 152 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 TAAR9Q96RI9 348 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 DUSP15Q9H1R2 295 aaPredicted RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 MOB1AQ9H8S9 216 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 RPA2P15927 270 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 ATP1B3P54709 279 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 PCBD1P61457 104 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 DOK3Q7L591 496 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 HSD17B13Q7Z5P4 300 aaPredicted RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 TSLPQ969D9 159 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 MRM2Q9UI43 246 aaKnown RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 SBF1O95248 1867 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 WNT11O96014 354 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 PLCXD3Q63HM9 321 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 LILRB2Q8N423 598 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 C2CD4CQ8TF44 421 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 EMC6Q9BV81 110 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 ZGLP1P0C6A0 271 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 TFF2Q03403 129 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 NPEPL1Q8NDH3 523 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 ZCCHC4Q9H5U6 513 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 WASF3Q9UPY6 502 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 RPS10-NUDT3A0A1W2PQS6 291 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 RPS10P46783 165 aaKnown RBP13.28□□□□□ -0.28
NUP50-201ENST00000347635 B3GNTL1Q67FW5 361 aaPredicted RBP13.28□□□□□ -0.28
NUP50-201ENST00000347635 TMEM88Q6PEY1 159 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 HGDQ93099 445 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 C14orf79Q96F83 325 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 PRSS27Q9BQR3 290 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.28□□□□□ -0.28
NUP50-201ENST00000347635 GPANK1O95872 356 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 TRILQ7L0X0 811 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 CPEB2Q7Z5Q1 589 aaKnown RBP13.28□□□□□ -0.28
NUP50-201ENST00000347635 PBOV1Q9GZY1 135 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 SLC5A6Q9Y289 635 aa13.28□□□□□ -0.28
NUP50-201ENST00000347635 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 CENPVL1A0A0U1RR11 272 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 LOC102725191A0A1B0GVB3 256 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 B3GALNT1O75752 331 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 TBXA2RP21731 343 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 ZNF133P52736 654 aaPredicted RBP13.27□□□□□ -0.28
NUP50-201ENST00000347635 CCL7P80098 99 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 FAM213BQ8TBF2 198 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 RRNAD1Q96FB5 475 aaKnown RBP13.27□□□□□ -0.28
NUP50-201ENST00000347635 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.28
NUP50-201ENST00000347635 DDAH2O95865 285 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 GFERP55789 205 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 DHRS2Q13268 280 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 ZADH2Q8N4Q0 377 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 UCK1Q9HA47 277 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 C12orf10Q9HB07 376 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 CDH20Q9HBT6 801 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 ZNF275Q9NSD4 429 aaPredicted RBP13.27□□□□□ -0.28
NUP50-201ENST00000347635 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.28
NUP50-201ENST00000347635 GON4LQ3T8J9 2241 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 IGKV1-8A0A0C4DH67 115 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 DPP4P27487 766 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 BVESQ8NE79 360 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 NKX3-1Q99801 234 aaPredicted RBP13.27□□□□□ -0.29
NUP50-201ENST00000347635 ZNF768Q9H5H4 540 aaKnown RBP13.27□□□□□ -0.29
NUP50-201ENST00000347635 NECAP2Q9NVZ3 263 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 ANKRD34CP0C6C1 535 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 GABRA1P14867 456 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.29
NUP50-201ENST00000347635 OR2W3Q7Z3T1 314 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 NMNAT2Q9BZQ4 307 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 NELFAQ9H3P2 528 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
NUP50-201ENST00000347635 FRRS1LQ9P0K9 344 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 PCDHGA1Q9Y5H4 931 aa13.27□□□□□ -0.29
NUP50-201ENST00000347635 CNOT4O95628 575 aaKnown RBP13.26□□□□□ -0.29
NUP50-201ENST00000347635 OGFOD3Q6PK18 319 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 MOB3CQ70IA8 216 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 PIGTQ969N2 578 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 ENKD1Q9H0I2 346 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 NTMQ9P121 344 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 PRELID3BQ9Y3B1 194 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 PTP4A3O75365 173 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
NUP50-201ENST00000347635 AVPR2P30518 371 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
NUP50-201ENST00000347635 MFAP5Q13361 173 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 ZDHHC22Q8N966 263 aa13.26□□□□□ -0.29
NUP50-201ENST00000347635 OPN4Q9UHM6 478 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms