RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF90Q03938 601 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 C17orf78Q8N4C9 275 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 CELF2-AS1Q8N7Q2 184 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 LILRA5A6NI73 299 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 NOXO1Q8NFA2 376 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 OR4Q3Q8NH05 313 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 COX7A2P2O60397 106 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 FAM162BQ5T6X4 162 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 TMEM268Q5VZI3 342 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 ASTLQ6HA08 431 aaPredicted RBP20.94■□□□□ 0.94
NPAS3-201ENST00000346562 LINC01465Q8N7H1 131 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 RBPMSQ93062 196 aaKnown RBP20.94■□□□□ 0.94
NPAS3-201ENST00000346562 LALBAP00709 142 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 OR5I1Q13606 314 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 TRILQ7L0X0 811 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 CCL4L1Q8NHW4 92 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 GABARAPL3Q9BY60 117 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 PIGMQ9H3S5 423 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 POMT2Q9UKY4 750 aa20.94■□□□□ 0.94
NPAS3-201ENST00000346562 OR2F2O95006 317 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 B4GALT1P15291 398 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 TGM1P22735 817 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR2F1Q13607 317 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 BTLAQ7Z6A9 289 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 DDOQ99489 341 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 CHST2Q9Y4C5 530 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 RPS19P39019 145 aaKnown RBP20.93■□□□□ 0.94
NPAS3-201ENST00000346562 HLA-BQ31612 363 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 DRAM2Q6UX65 266 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR52I2Q8NH67 350 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 FAM173AQ9BQD7 235 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR6C68A6NDL8 312 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR1C1Q15619 314 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR52N5Q8NH56 324 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 PELI1Q96FA3 418 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 PCED1AQ9H1Q7 454 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 HES4Q9HCC6 221 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 PSENENQ9NZ42 101 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 PPP5D1E7EU14 171 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 SMLR1H3BR10 107 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 MAGEB4O15481 346 aaPredicted RBP20.93■□□□□ 0.94
NPAS3-201ENST00000346562 CTU2Q2VPK5 515 aaKnown RBP20.93■□□□□ 0.94
NPAS3-201ENST00000346562 RSPO2Q6UXX9 243 aaPredicted RBP20.93■□□□□ 0.94
NPAS3-201ENST00000346562 CHRDL1Q9BU40 450 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 SLC25A19Q9HC21 320 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 MED29Q9NX70 200 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 OR7C2O60412 319 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 SMIM17P0DL12 118 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 BSGP35613 385 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 ALKBH6Q3KRA9 238 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 TOR2AQ5JU69 321 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 RHOUQ7L0Q8 258 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 TEX101Q9BY14 249 aa20.93■□□□□ 0.94
NPAS3-201ENST00000346562 SLC2A10O95528 541 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 RFC3P40938 356 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 FUT6P51993 359 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 GFERP55789 205 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 IGLV3-27P01718 113 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 ABCD3P28288 659 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 OR1J1Q8NGS3 322 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 OR2T6Q8NHC8 308 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 HINT3Q9NQE9 182 aaKnown RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 ONECUT1Q9UBC0 465 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 METTL12A8MUP2 240 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 DHHO43323 396 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 SLC25A6P12236 298 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 FOXF1Q12946 379 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 MRPL58Q14197 206 aaKnown RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 SLC17A1Q14916 467 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 TCTN3Q6NUS6 607 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 OSR2Q8N2R0 312 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 MFSD4AQ8N468 514 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 LINC00615Q96LM1 132 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 PLA2G12AQ9BZM1 189 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 GAR1Q9NY12 217 aaKnown RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 NME2P1O60361 137 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 TSPAN12O95859 305 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 CD1EP15812 388 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 EIF3IQ13347 325 aaKnown RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 TRA2AQ13595 282 aaKnown RBP eCLIP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 SPACA9Q96E40 222 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 AKR1E2Q96JD6 320 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 TINAGL1Q9GZM7 467 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 BCL2L10Q9HD36 194 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 GDF2Q9UK05 429 aaPredicted RBP20.92■□□□□ 0.94
NPAS3-201ENST00000346562 CHD4Q14839 1912 aa20.92■□□□□ 0.94
NPAS3-201ENST00000346562 CBR1P16152 277 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 COX5AP20674 150 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 AGBL4Q5VU57 503 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 APOBEC3DQ96AK3 386 aaPredicted RBP20.91■□□□□ 0.94
NPAS3-201ENST00000346562 GALMQ96C23 342 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 IAPPP10997 89 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 FCGR2CP31995 323 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 ZNF251Q9BRH9 671 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 TRAV17A0A0B4J275 112 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 E5RGE8 158 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 LINC01565O15544 149 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 LYSMD2Q8IV50 215 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 SARGQ9BW04 601 aa20.91■□□□□ 0.94
NPAS3-201ENST00000346562 MYOZ1Q9NP98 299 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms