RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 XKRXQ6PP77 449 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 NAA40Q86UY6 237 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 SERPINA12Q8IW75 414 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 C9orf106Q8NAJ2 232 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 FGGYQ96C11 551 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 SP140LQ9H930 580 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 ATPIF1Q9UII2 106 aa18.77■□□□□ 0.6
TSPAN3-202ENST00000346495 FREM1Q5H8C1 2179 aa18.77■□□□□ 0.59
TSPAN3-202ENST00000346495 ZFHX4Q86UP3 3567 aa18.77■□□□□ 0.59
TSPAN3-202ENST00000346495 A0A096LPE4 126 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 A0A1W2PPZ6 126 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 TBX1O43435 398 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 LMX1BO60663 402 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 IGLV3-1P01715 115 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 GABRA1P14867 456 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 CXADRP78310 365 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 IFITM3Q01628 133 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 ZNF79Q15937 498 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 TFAP2EQ6VUC0 442 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 DPPA2Q7Z7J5 298 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 GCNT2Q8N0V5 402 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 DNAAF1Q8NEP3 725 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 OR52H1Q8NGJ2 320 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 CMTM3Q96MX0 182 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 SOSTQ9BQB4 213 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 SRRQ9GZT4 340 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 ABCB10Q9NRK6 738 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 CYSLTR2Q9NS75 346 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 ZNF224Q9NZL3 707 aa18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 URB1O60287 2271 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-202ENST00000346495 LOC400499M0QZD8 3231 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 CALCBP10092 127 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 CFPP27918 469 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 TALDO1P37837 337 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 PABPC1L2AQ5JQF8 200 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 ANKRD16Q6P6B7 361 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 SNX29P2Q8IUI4 249 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 CCDC54Q8NEL0 328 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 OR1K1Q8NGR3 316 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 OR1J2Q8NGS2 313 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 OR5H6Q8NGV6 325 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 SDHCQ99643 169 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 OR10A2Q9H208 303 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 ASPMQ8IZT6 3477 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 FRYQ5TBA9 3013 aa18.75■□□□□ 0.59
TSPAN3-202ENST00000346495 A0A0B4J203 849 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 WDR1O75083 606 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 APOA1P02647 267 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 EIF4EP06730 217 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ZNF20P17024 532 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 PTGER4P35408 488 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ARR3P36575 388 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 RGS21Q2M5E4 152 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 GLT8D1Q68CQ7 371 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ZNF324BQ6AW86 544 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 TMEM53Q6P2H8 277 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 GDPD1Q8N9F7 314 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 OR6K3Q8NGY3 331 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 LGALS14Q8TCE9 139 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 FAM71F1Q96KD3 344 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 LIN7BQ9HAP6 207 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ZNF71Q9NQZ8 489 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 EXTL2Q9UBQ6 330 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 STEAP1Q9UHE8 339 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ACACAQ13085 2346 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ISPDA4D126 451 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 CNOT4O95628 575 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 IL18BPO95998 194 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ITGA5P08648 1049 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 COX5BP10606 129 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 GNALP38405 381 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 DDOSTP39656 456 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 SCAND1P57086 179 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 GFOD2Q3B7J2 385 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 NKAIN3Q8N8D7 197 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 CNEP1R1Q8N9A8 125 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 PLPP7Q8NBV4 271 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 OR5D14Q8NGL3 314 aa18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 ADAT3Q96EY9 351 aaPredicted RBP18.74■□□□□ 0.59
TSPAN3-202ENST00000346495 MBD3L4A6NDZ8 208 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 MBD3L3A6NE82 208 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 MBD3L5A6NJ08 208 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 E9PLN8 166 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 UBL3O95164 117 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 HLA-HP01893 362 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 TPOP07202 933 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 ABOP16442 354 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 ANOS1P23352 680 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 KIR2DL2P43627 348 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 PYDC2Q56P42 97 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 UBE2NLQ5JXB2 153 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 LYSMD2Q8IV50 215 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 OR14K1Q8NGZ2 314 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 MBD3L2Q8NHZ7 208 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 NANOS1Q8WY41 292 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 BCL2L2Q92843 193 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 LYZL4Q96KX0 146 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 PPP1R3EQ9H7J1 279 aa18.73■□□□□ 0.59
TSPAN3-202ENST00000346495 ETV7Q9Y603 341 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms