RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FAM74A3Q4VXF1 159 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 C1orf140Q5VVS0 124 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 CYHR1Q6ZMK1 362 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 SUCNR1Q9BXA5 334 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 SEC11CQ9BY50 192 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 ZAR1LA6NP61 321 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 HNF1AP20823 631 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 UTP23Q9BRU9 249 aaKnown RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 MS4A8Q9BY19 250 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 HS3ST2Q9Y278 367 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PIGPP57054 158 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF528Q3MIS6 628 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SOWAHCQ53LP3 525 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF429Q86V71 674 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SIGLEC6O43699 453 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PJVKQ0ZLH3 352 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF718Q3SXZ3 478 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SLC48A1Q6P1K1 146 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ZMAT3Q9HA38 289 aaKnown RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SLC25A19Q9HC21 320 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PTRH2Q9Y3E5 179 aaKnown RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 LGALS4P56470 323 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 DEFB110Q30KQ9 67 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ELFN2Q5R3F8 820 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ETFRF1Q6IPR1 90 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 MAVSQ7Z434 540 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 UBE3DQ7Z6J8 389 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 DND1Q8IYX4 353 aaKnown RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ANAPC16Q96DE5 110 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SYT11Q9BT88 431 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 FLVCR2Q9UPI3 526 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 KIAA1324LA8MWY0 1029 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ARPC3O15145 178 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SELENOFO60613 162 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 RAB24Q969Q5 203 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 CA14Q9ULX7 337 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 TMED7-TICAM2A0A0A6YYA0 188 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 H0YGG7 62 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 CST4P01036 141 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF391Q9UJN7 358 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 SLC5A6Q9Y289 635 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 TMED7Q9Y3B3 224 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PRAMEF25A6NGN4 478 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 ARR3P36575 388 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PRAMEF5Q5TYX0 476 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 PRAMEF6Q5VXH4 476 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 GLDNQ6ZMI3 551 aaPredicted RBP17.69■□□□□ 0.42
HDAC4-201ENST00000345617 IKZF5Q9H5V7 419 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 FKBP11Q9NYL4 201 aa17.69■□□□□ 0.42
HDAC4-201ENST00000345617 TOX3O15405 576 aaPredicted RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 AAMDCQ9H7C9 122 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 PISDQ9UG56 409 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 POMT2Q9UKY4 750 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 PCBP4P57723 403 aaKnown RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ZDHHC22Q8N966 263 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 FBXW5Q969U6 566 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 NEIL1Q96FI4 390 aaPredicted RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 SPTAN1Q13813 2472 aaKnown RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 HCRTR1O43613 425 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 GNG4P50150 75 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 SEMA3BQ13214 749 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 AREGP15514 252 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 CAMKMTQ7Z624 323 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 MANBALQ9NQG1 85 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 DGCR2P98153 550 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 C11orf87Q6NUJ2 197 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 SERTM2A0A1B0GWG4 89 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 HMSDA8MTL9 139 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 RD3LP0DJH9 198 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 CCL5P13501 91 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 DCDP81605 110 aaKnown RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 PMS2P11Q13670 270 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 RPEL1Q2QD12 228 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 FFAR4Q5NUL3 377 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 SLCO4C1Q6ZQN7 724 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 USP53Q70EK8 1073 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 OR51F2Q8NH61 342 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF426Q9BUY5 554 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 GLIPR2Q9H4G4 154 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ABOP16442 354 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ARRB2P32121 409 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 CSF2RBP32927 897 aa17.68■□□□□ 0.42
HDAC4-201ENST00000345617 GDF2Q9UK05 429 aaPredicted RBP17.68■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF816-ZNF321PA0A0X1KG74 233 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 AQP7O14520 342 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 HLXQ14774 488 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 CLPPQ16740 277 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 MIDNQ504T8 468 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 YIPF6Q96EC8 236 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 SAT2Q96F10 170 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 SMIM21Q3B7S5 101 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 HSD11B1LQ7Z5J1 315 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 PATJQ8NI35 1801 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 SLC25A6P12236 298 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 RACK1P63244 317 aaKnown RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 Q6ZPB1 254 aaPredicted RBP17.67■□□□□ 0.42
HDAC4-201ENST00000345617 COMMD5Q9GZQ3 224 aa17.67■□□□□ 0.42
HDAC4-201ENST00000345617 AP4M1O00189 453 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms