RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
HMGN3-202ENST00000344726 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
HMGN3-202ENST00000344726 G6PC2Q9NQR9 355 aa12.18□□□□□ -0.46
HMGN3-202ENST00000344726 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
HMGN3-202ENST00000344726 PDP1Q9P0J1 537 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-202ENST00000344726 IL19Q9UHD0 177 aa12.18□□□□□ -0.46
HMGN3-202ENST00000344726 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 M0R135 149 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 GNGT2O14610 69 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 GSC2O15499 205 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 MLNRO43193 412 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 AVPP01185 164 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 LCATP04180 440 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 PRKACGP22612 351 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 FMO3P31513 532 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-202ENST00000344726 CBX1P83916 185 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-202ENST00000344726 SNAI3Q3KNW1 292 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 ACSM5Q6NUN0 579 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF283Q8N7M2 679 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 PAPD5Q8NDF8 572 aaKnown RBP12.17□□□□□ -0.46
HMGN3-202ENST00000344726 BHLHE23Q8NDY6 225 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 TIMD4Q96H15 378 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 SLC30A2Q9BRI3 323 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 DDX28Q9NUL7 540 aaKnown RBP12.17□□□□□ -0.46
HMGN3-202ENST00000344726 TMEM106BQ9NUM4 274 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 NPTNQ9Y639 398 aa12.17□□□□□ -0.46
HMGN3-202ENST00000344726 RIIAD1A6NNX1 92 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 H3BN98 237 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF593O00488 134 aaPredicted RBP12.16□□□□□ -0.46
HMGN3-202ENST00000344726 PLPP2O43688 288 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 IFNGP01579 166 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 SPARCP09486 303 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF3P17036 446 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 TNFSF4P23510 183 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 GRK5P34947 590 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 ENTPD1P49961 510 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 TPTEP56180 551 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 OR6K6Q8NGW6 343 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 OR51F2Q8NH61 342 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 ST7LQ8TDW4 575 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
HMGN3-202ENST00000344726 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 NTN4Q9HB63 628 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
HMGN3-202ENST00000344726 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 ISPDA4D126 451 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 F5H5P2 479 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 E2F6O75461 281 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 HLA-DPB1P04440 258 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 SELEP16581 610 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 POU1F1P28069 291 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
HMGN3-202ENST00000344726 MMP16P51512 607 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 GINS1Q14691 196 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 OR13G1Q8NGZ3 307 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.46
HMGN3-202ENST00000344726 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 MEGF10Q96KG7 1140 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
HMGN3-202ENST00000344726 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 TIPRLO75663 272 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SBK2P0C263 348 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SLC2A1P11166 492 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 OSMP13725 252 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SLC6A9P48067 706 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 PRKXP51817 358 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 CDK5Q00535 292 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF92Q03936 586 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 GLYATL3Q5SZD4 288 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SLC27A4Q6P1M0 643 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 DPY19L4Q7Z388 723 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
HMGN3-202ENST00000344726 SPTSSAQ969W0 71 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
HMGN3-202ENST00000344726 OTULINQ96BN8 352 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 AMELYQ99218 206 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 COPS4Q9BT78 406 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 TMPRSS13Q9BYE2 586 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms