RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 FAM166AQ6J272 317 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 ZNF544Q6NX49 715 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 METAP1DQ6UB28 335 aaPredicted RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 OR5M9Q8NGP3 310 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 FAM71F1Q96KD3 344 aaPredicted RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 WACQ9BTA9 647 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 RHBDD3Q9Y3P4 386 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 ARHGAP21Q5T5U3 1957 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 KRT33AO76009 404 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 CD2P06729 351 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 CST2P09228 141 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 CRYGSP22914 178 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 SLC6A9P48067 706 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 PITPNBP48739 271 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 ZNF813Q6ZN06 617 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 LUZP2Q86TE4 346 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 SLC25A28Q96A46 364 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 C11orf54Q9H0W9 315 aaPredicted RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 WNT5BQ9H1J7 359 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 NIPAL2Q9H841 368 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
CDC42-202ENST00000344548 FOXJ3Q9UPW0 622 aa11.88□□□□□ -0.51
CDC42-202ENST00000344548 IGF2RP11717 2491 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 ZNF724A8MTY0 619 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 SGCEO43556 437 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 FSTP19883 344 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 GRB2P62993 217 aaKnown RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 FAPQ12884 760 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 CCBE1Q6UXH8 406 aaPredicted RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 CHMP1BQ7LBR1 199 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 GLCCI1Q86VQ1 547 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 SIAH3Q8IW03 269 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 GCNT2Q8N0V5 402 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 CELF2-AS1Q8N7Q2 184 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 CPEB3Q8NE35 698 aaKnown RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 ZFP3Q96NJ6 502 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 NOX3Q9HBY0 568 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 PAQR5Q9NXK6 330 aaPredicted RBP11.87□□□□□ -0.51
CDC42-202ENST00000344548 ADAM30Q9UKF2 790 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
CDC42-202ENST00000344548 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 M0R135 149 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 IGLV3-1P01715 115 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 GLYATL3Q5SZD4 288 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SLC16A14Q7RTX9 510 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 ADGRE4PQ86SQ3 457 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 COMMD2Q86X83 199 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 RBMXL3Q8N7X1 1067 aaKnown RBP11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR13C9Q8NGT0 318 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SYNPRQ8TBG9 265 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SNRNP27Q8WVK2 155 aaKnown RBP11.86□□□□□ -0.51
CDC42-202ENST00000344548 TRIM63Q969Q1 353 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 ZNF799Q96GE5 643 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SPACA5Q96QH8 159 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 LINC00470Q9BZP3 86 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 PRDM14Q9GZV8 571 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 STEAP1Q9UHE8 339 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 CD37P11049 281 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 AGTR1P30556 359 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 GNALP38405 381 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SRP9P49458 86 aaKnown RBP11.86□□□□□ -0.51
CDC42-202ENST00000344548 DGCR2P98153 550 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 ZNF169Q14929 603 aaPredicted RBP11.86□□□□□ -0.51
CDC42-202ENST00000344548 RNPS1Q15287 305 aaKnown RBP11.86□□□□□ -0.51
CDC42-202ENST00000344548 C2orf76Q3KRA6 126 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR10K2Q6IF99 312 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 IGFL3Q6UXB1 125 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 ZADH2Q8N4Q0 377 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR2AE1Q8NHA4 323 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 PGAM5Q96HS1 289 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 OR2H1Q9GZK4 316 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 MYO7BQ6PIF6 2116 aa11.86□□□□□ -0.51
CDC42-202ENST00000344548 A0A1B0GVI7 797 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 OR6C6A6NF89 314 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 SLC17A2O00624 439 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
CDC42-202ENST00000344548 KDM4BO94953 1096 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 PTTG1O95997 202 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 HLA-HP01893 362 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 HLA-DQB1P01920 261 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CD3GP09693 182 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 TALDO1P37837 337 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 POU3F4P49335 361 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 SCN1BQ07699 218 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CD300CQ08708 224 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 CARTPTQ16568 116 aa11.85□□□□□ -0.51
CDC42-202ENST00000344548 FGD2Q7Z6J4 655 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms