RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 TIMP3P35625 211 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 ZFP36L2P47974 494 aaKnown RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 FOXL2P58012 376 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 SLC17A1Q14916 467 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 CTSL3PQ5NE16 218 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 SMARCD3Q6STE5 483 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 OR6V1Q8N148 313 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 CSNK2A3Q8NEV1 391 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 OR1J1Q8NGS3 322 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 KIRREL1Q96J84 757 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 RGCCQ9H4X1 137 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 KCNE5Q9UJ90 142 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 LRP12Q9Y561 859 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 PDYNP01213 254 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 RBMS1P29558 406 aaKnown RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 TNFRSF4P43489 277 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 POLR2HP52434 150 aaKnown RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 MVDP53602 400 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 OR5M3Q8NGP4 307 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 FGF14Q92915 247 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 RAB1CQ92928 201 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 FAM46AQ96IP4 442 aaKnown RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 PRAP1Q96NZ9 151 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 Q9N2J8 555 aa15.21■□□□□ 0.03
CDK11B-201ENST00000340677 DCAF13Q9NV06 445 aaKnown RBP15.21■□□□□ 0.03
CDK11B-201ENST00000340677 TRAV14DV4A0A0A6YYC5 116 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 TVP23AA6NH52 213 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 TBX6O95947 436 aaPredicted RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 GIPRP48546 466 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 UBE2KP61086 200 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 RTN4RL2Q86UN3 420 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 ZNF548Q8NEK5 533 aaPredicted RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 OR1J2Q8NGS2 313 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 THEM6Q8WUY1 208 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 RNF141Q8WVD5 230 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 SECTM1Q8WVN6 248 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 C1GALT1C1Q96EU7 318 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 LOXL4Q96JB6 756 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 BOCQ9BWV1 1114 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 HEBP1Q9NRV9 189 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 WNT16Q9UBV4 365 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 CRLS1Q9UJA2 301 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 TNFSF18Q9UNG2 199 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 FNDC3AQ9Y2H6 1198 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 OR1I1O60431 355 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 EIF4EP06730 217 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 CXCL1P09341 107 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 FGF5P12034 268 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 SDC1P18827 310 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 PSMB1P20618 241 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 PRDX3P30048 256 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 RPS25P62851 125 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 VTCN1Q7Z7D3 282 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 NANOS1Q8WY41 292 aaKnown RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 PHF7Q9BWX1 381 aaPredicted RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 CNTD2Q9H8S5 307 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 MTHFD2LQ9H903 347 aaPredicted RBP15.2■□□□□ 0.02
CDK11B-201ENST00000340677 CD207Q9UJ71 328 aa15.2■□□□□ 0.02
CDK11B-201ENST00000340677 IGHV2OR16-5A0A0B4J2B6 119 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 SNRPGP15A8MWD9 76 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 CD74P04233 296 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 DPP4P27487 766 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 NSG1P42857 185 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 CDC42P60953 191 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 RAB1AP62820 205 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 TDRG1Q3Y452 100 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 C6orf15Q6UXA7 325 aaPredicted RBP15.19■□□□□ 0.02
CDK11B-201ENST00000340677 ACOT7LQ6ZUV0 252 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 SNX22Q96L94 193 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 GPR21Q99679 349 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 ALG12Q9BV10 488 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 CCL27Q9Y4X3 112 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 DIRAS1O95057 198 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 LIPCP11150 499 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 CKS1BP61024 79 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 GPR157Q5UAW9 335 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 PARS2Q7L3T8 475 aaKnown RBP15.19■□□□□ 0.02
CDK11B-201ENST00000340677 SYT13Q7L8C5 426 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 WDR53Q7Z5U6 358 aaPredicted RBP15.19■□□□□ 0.02
CDK11B-201ENST00000340677 RBM45Q8IUH3 476 aaKnown RBP15.19■□□□□ 0.02
CDK11B-201ENST00000340677 OR9K2Q8NGE7 335 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 GPR146Q96CH1 333 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 MUCL1Q96DR8 90 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 RIOK2Q9BVS4 552 aaKnown RBP15.19■□□□□ 0.02
CDK11B-201ENST00000340677 TAS2R5Q9NYW4 299 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 MTCH1Q9NZJ7 389 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 RNF115Q9Y4L5 304 aa15.19■□□□□ 0.02
CDK11B-201ENST00000340677 E7EQ34 232 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 GOSR2O14653 212 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 OR1F1O43749 312 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 FAHP16930 419 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 DVL1P1P54792 670 aaPredicted RBP15.18■□□□□ 0.02
CDK11B-201ENST00000340677 DGCR2P98153 550 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 KLF9Q13886 244 aaPredicted RBP15.18■□□□□ 0.02
CDK11B-201ENST00000340677 ZNF345Q14585 488 aa15.18■□□□□ 0.02
CDK11B-201ENST00000340677 OR4A47Q6IF82 309 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms