RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OR51V1Q9H2C8 321 aa13.07□□□□□ -0.32
VAPA-201ENST00000340541 SEMA6AQ9H2E6 1030 aa13.07□□□□□ -0.32
VAPA-201ENST00000340541 KRT84Q9NSB2 600 aa13.07□□□□□ -0.32
VAPA-201ENST00000340541 ZNF275Q9NSD4 429 aaPredicted RBP13.07□□□□□ -0.32
VAPA-201ENST00000340541 KCNS2Q9ULS6 477 aa13.07□□□□□ -0.32
VAPA-201ENST00000340541 TANC2Q9HCD6 1990 aa13.07□□□□□ -0.32
VAPA-201ENST00000340541 LRP5LA4QPB2 252 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 C5orf63A6NC05 138 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 M0R135 149 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 PRODHO43272 600 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 CDC14BO60729 498 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 CD55P08174 381 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 HNF1AP20823 631 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 TPTEP56180 551 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 EFNB1P98172 346 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 USP51Q70EK9 711 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 DPY19L4Q7Z388 723 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 ERI1Q8IV48 349 aaKnown RBP13.06□□□□□ -0.32
VAPA-201ENST00000340541 OR5L1Q8NGL2 311 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 ZMYND19Q96E35 227 aaPredicted RBP13.06□□□□□ -0.32
VAPA-201ENST00000340541 ZNF799Q96GE5 643 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 AMELYQ99218 206 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.06□□□□□ -0.32
VAPA-201ENST00000340541 ZDHHC8Q9ULC8 765 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 OAZ3Q9UMX2 235 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 CACNG2Q9Y698 323 aa13.06□□□□□ -0.32
VAPA-201ENST00000340541 LOC100289279A0A1B0GTE1 492 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 PRKYO43930 277 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 LCATP04180 440 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 SRD5A1P18405 259 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 IL2RGP31785 369 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 TMEM33P57088 247 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 GK2Q14410 553 aaPredicted RBP13.05□□□□□ -0.32
VAPA-201ENST00000340541 SNAPC1Q16533 368 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 SNAI3Q3KNW1 292 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 OR2T2Q6IF00 324 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 OR6N2Q8NGY6 317 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 RNF133Q8WVZ7 376 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 SPTSSAQ969W0 71 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
VAPA-201ENST00000340541 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 CIB1Q99828 191 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 PKP2Q99959 881 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 ABHD6Q9BV23 337 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 SAP30LQ9HAJ7 183 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 DECR2Q9NUI1 292 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 TVP23BQ9NYZ1 205 aa13.05□□□□□ -0.32
VAPA-201ENST00000340541 IGHV1-69-2A0A0G2JMI3 117 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 A0A1B0GWJ7 208 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 CCDC182A6NF36 153 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 SAC3D1A6NKF1 404 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 ZNF878C9JN71 531 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 WNT9BO14905 357 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 SELENOFO60613 162 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
VAPA-201ENST00000340541 POLR2IP36954 125 aaKnown RBP13.04□□□□□ -0.32
VAPA-201ENST00000340541 GPR6P46095 362 aaPredicted RBP13.04□□□□□ -0.32
VAPA-201ENST00000340541 PRSS12P56730 875 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 HNRNPA0Q13151 305 aaKnown RBP13.04□□□□□ -0.32
VAPA-201ENST00000340541 EIF2B1Q14232 305 aaKnown RBP13.04□□□□□ -0.32
VAPA-201ENST00000340541 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 SLC35D3Q5M8T2 416 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 C12orf73Q69YU5 71 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 SPATC1Q76KD6 591 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 OR5AS1Q8N127 324 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 PLEKHA8Q96JA3 519 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 CENPMQ9NSP4 180 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 KLHDC2Q9Y2U9 406 aa13.04□□□□□ -0.32
VAPA-201ENST00000340541 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 M0R129 80 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
VAPA-201ENST00000340541 IGFBP5P24593 272 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 OPRL1P41146 370 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 PRKXP51817 358 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 CHN2P52757 468 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 TNFAIP6P98066 277 aaPredicted RBP13.03□□□□□ -0.32
VAPA-201ENST00000340541 APOFQ13790 326 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 ZFP1Q6P2D0 407 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 SHFQ7M4L6 423 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 PRSS45Q7RTY3 260 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 OR2Z1Q8NG97 314 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 HPS1Q92902 700 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 GABARAPL3Q9BY60 117 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 DYSFO75923 2080 aa13.03□□□□□ -0.32
VAPA-201ENST00000340541 MLNRO43193 412 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 PPIHO43447 177 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms