RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TMEM91Q6ZNR0 172 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 ST8SIA4Q92187 359 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 MCHR2Q969V1 340 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 RNF32Q9H0A6 362 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 HDGFL3Q9Y3E1 203 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 EFSO43281 561 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 EIF1BO60739 113 aaKnown RBP14.09□□□□□ -0.15
PDGFB-201ENST00000331163 UPK3AO75631 287 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 APOC3P02656 99 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 TCRBP04435 133 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 DBHP09172 617 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 HTR5AP47898 357 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR9K2Q8NGE7 335 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR52N5Q8NH56 324 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 PNPLA2Q96AD5 504 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 CREB3L1Q96BA8 519 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 ELMOD3Q96FG2 381 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR10A4Q9H209 315 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 ELF5Q9UKW6 265 aaPredicted RBP14.09□□□□□ -0.15
PDGFB-201ENST00000331163 CD2P06729 351 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR2T7P0C7T2 308 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 BMP5P22003 454 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 NUP62P37198 522 aaPredicted RBP14.09□□□□□ -0.15
PDGFB-201ENST00000331163 HSD17B12Q53GQ0 312 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 TMEM81Q6P7N7 255 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 MS4A15Q8N5U1 240 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 FAM71CQ8NEG0 241 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR2T27Q8NH04 317 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 ABHD1Q96SE0 405 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 AIFM2Q9BRQ8 373 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 SLC22A20A6NK97 555 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 EDN3P14138 238 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 LCN1P31025 176 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 SUMO3P55854 103 aaPredicted RBP14.09□□□□□ -0.15
PDGFB-201ENST00000331163 RNFT1Q5M7Z0 435 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 SPATA46Q5T0L3 261 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 SIAH3Q8IW03 269 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 SPACA3Q8IXA5 215 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 CHST4Q8NCG5 386 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 OR13C3Q8NGS6 347 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 PELI1Q96FA3 418 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 TMEM14AQ9Y6G1 99 aa14.09□□□□□ -0.15
PDGFB-201ENST00000331163 HCKP08631 526 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 DGCR2P98153 550 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 PXKQ7Z7A4 578 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 PLPP7Q8NBV4 271 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 NOX4Q9NPH5 578 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 WNK2Q9Y3S1 2297 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 KLF4O43474 513 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 GUSBP08236 651 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 H2AFB2P0C5Z0 115 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF20P17024 532 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 C17orf107Q6ZR85 190 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 ACBD4Q8NC06 268 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 OR51A4Q8NGJ6 313 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 KCNMB2Q9Y691 235 aa14.08□□□□□ -0.16
PDGFB-201ENST00000331163 CSN2P05814 226 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 SNRPBP14678 240 aaKnown RBP14.07□□□□□ -0.16
PDGFB-201ENST00000331163 RPL35P42766 123 aaKnown RBP14.07□□□□□ -0.16
PDGFB-201ENST00000331163 BLVRAP53004 296 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ACTA2P62736 377 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ACTG2P63267 376 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 FAM180AQ6UWF9 173 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 APH1AQ96BI3 265 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ZMAT3Q9HA38 289 aaKnown RBP14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ARPC3O15145 178 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ID4P47928 161 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 PITPNBP48739 271 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 DEFA5Q01523 94 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 POU4F2Q12837 409 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 TUSC1Q2TAM9 212 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 JMJD6Q6NYC1 403 aaPredicted RBP14.07□□□□□ -0.16
PDGFB-201ENST00000331163 FAAP20Q6NZ36 180 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 GPALPP1Q8IXQ4 340 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF101Q8IZC7 436 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 OR2AE1Q8NHA4 323 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 CKLFQ9UBR5 152 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 DHDHQ9UQ10 334 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 TP53TG5Q9Y2B4 290 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 A0A1B0GVI7 797 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 MEIS3P1A6NDR6 274 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 LRRC3CA6NJW4 275 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 SYT7O43581 403 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ACSM4P0C7M7 580 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 CTRB1P17538 263 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ST3GAL2Q16842 350 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 CTRB2Q6GPI1 263 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 OR13C9Q8NGT0 318 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ABHD4Q8TB40 342 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 S100A13Q99584 98 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 ZNF416Q9BWM5 594 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 PPA2Q9H2U2 334 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 C1orf198Q9H425 327 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 C12orf10Q9HB07 376 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 SESN1Q9Y6P5 492 aa14.07□□□□□ -0.16
PDGFB-201ENST00000331163 TRGV8A0A0C4DH27 118 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 LINC00862A6NCI5 91 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 E9PQ18 207 aa14.06□□□□□ -0.16
PDGFB-201ENST00000331163 SLC6A1P30531 599 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms