RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 VAMP5O95183 116 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 OR5AC1P0C628 307 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 NPPBP16860 134 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 CHATP28329 748 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 CDC34P49427 236 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 FGF8P55075 233 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF616Q08AN1 781 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 MRPL49Q13405 166 aaKnown RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 CLEC1AQ8NC01 280 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PLPP5Q8NEB5 264 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF845Q96IR2 970 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 SLC35G5Q96KT7 338 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 STACQ99469 402 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 OR8D2Q9GZM6 311 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PCED1AQ9H1Q7 454 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PPIAL4AQ9Y536 164 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 KLF4O43474 513 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PIAS2O75928 621 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 ZFPL1O95159 310 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 AMY2AP04746 511 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 NR2F1P10589 423 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 FGF5P12034 268 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 PPICP45877 212 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 TAS2R41P59536 307 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 TAS2R19P59542 299 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 IQCJQ1A5X6 159 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 AWAT2Q6E213 333 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 RFLNAQ6ZTI6 216 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
SHMT2-201ENST00000328923 CMTM1Q8IZ96 169 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 HS6ST3Q8IZP7 471 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 OR2T33Q8NG76 320 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF480Q8WV37 535 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 SLC5A7Q9GZV3 580 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 SLC26A1Q9H2B4 701 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 DKKL1Q9UK85 242 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 OR52A1Q9UKL2 312 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 V9GY05 133 aa10.64□□□□□ -0.71
SHMT2-201ENST00000328923 A0A1B0GV50 99 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 CSN2P05814 226 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 IRF1P10914 325 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ZBTB25P24278 435 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 KHKP50053 298 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 POLR2HP52434 150 aaKnown RBP10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ZP2Q05996 745 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ST3GAL3Q11203 375 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 DECR1Q16698 335 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SOHLH1Q5JUK2 328 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 IER5LQ5T953 404 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 LYG2Q86SG7 212 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ARL14Q8N4G2 192 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 OR1P1Q8NH06 330 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 WFDC5Q8TCV5 224 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 C15orf40Q8WUR7 153 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 DIO2Q92813 273 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 WBP2Q969T9 261 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 CUTCQ9NTM9 273 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 USP36Q9P275 1121 aaKnown RBP10.63□□□□□ -0.71
SHMT2-201ENST00000328923 B3GAT1Q9P2W7 334 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 PCYT1BQ9Y5K3 369 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-201ENST00000328923 HPRT1P00492 218 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 MELTFP08582 738 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SLC35G6P0C7Q6 338 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 OR5H8P0DN80 308 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 EDNRAP25101 427 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SNRPD1P62314 119 aaKnown RBP10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ACTA2P62736 377 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ACTG2P63267 376 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ACTC1P68032 377 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ACTA1P68133 377 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 NFATC4Q14934 902 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 COL5A1-AS1Q5SY13 56 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 PIP5KL1Q5T9C9 394 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 LEG1Q6P5S2 330 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF619Q8N2I2 560 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 BOD1Q96IK1 185 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 SAMD8Q96LT4 415 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ADAD1Q96M93 576 aaKnown RBP10.63□□□□□ -0.71
SHMT2-201ENST00000328923 RNF2Q99496 336 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 ARHGDIGQ99819 225 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 CST11Q9H112 138 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 VSIG4Q9Y279 399 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 CHD7Q9P2D1 2997 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 HEATR5AQ86XA9 2040 aa10.63□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM202A6NGA9 273 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 CPSF4LA6NMK7 179 aaKnown RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 H3BQ15 152 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 FCMRO60667 390 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 ELLP55199 621 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-201ENST00000328923 ACTBP60709 375 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 ACTG1P63261 375 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 HSPB3Q12988 150 aa10.62□□□□□ -0.71
SHMT2-201ENST00000328923 CDK5R1Q15078 307 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms