RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 LANCL1O43813 399 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 LMX1BO60663 402 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 MAS1P04201 325 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 CD2P06729 351 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 IGFBP3P17936 291 aaPredicted RBP13.8□□□□□ -0.2
CALR-201ENST00000316448 RANBP1P43487 201 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 CD300CQ08708 224 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 RNPS1Q15287 305 aaKnown RBP13.8□□□□□ -0.2
CALR-201ENST00000316448 HACD4Q5VWC8 232 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 SLC7A6Q92536 515 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 FOXB1Q99853 325 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 THAP7Q9BT49 309 aaPredicted RBP13.8□□□□□ -0.2
CALR-201ENST00000316448 LINC00470Q9BZP3 86 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 NIPAL2Q9H841 368 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 MOB1AQ9H8S9 216 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
CALR-201ENST00000316448 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 SLC5A6Q9Y289 635 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 CACNA1GO43497 2377 aa13.8□□□□□ -0.2
CALR-201ENST00000316448 TTRP02766 147 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 SLC2A1P11166 492 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
CALR-201ENST00000316448 KIR2DL3P43628 341 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 PITPNAQ00169 270 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 TMEM244Q5VVB8 128 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 SKA3Q8IX90 412 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 ELMOD2Q8IZ81 293 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 NUFIP1Q9UHK0 495 aaKnown RBP13.79□□□□□ -0.2
CALR-201ENST00000316448 PRSS50Q9UI38 385 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 ZNF175Q9Y473 711 aa13.79□□□□□ -0.2
CALR-201ENST00000316448 P2RY10O00398 339 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 RRP8O43159 456 aaKnown RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 GSTZ1O43708 216 aaPredicted RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 ACSM4P0C7M7 580 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 CD37P11049 281 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 AGTR1P30556 359 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 ARF1P84077 181 aaKnown RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 FAM166AQ6J272 317 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 MZT2BQ6NZ67 158 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 KLHL24Q6TFL4 600 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 MCEMP1Q8IX19 187 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 SLC22A24Q8N4F4 322 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 OR13C3Q8NGS6 347 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 RAB40AQ8WXH6 277 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 YIPF5Q969M3 257 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 SOX7Q9BT81 388 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 PBOV1Q9GZY1 135 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 ANKRD11Q6UB99 2663 aaPredicted RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 MED12LQ86YW9 2145 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 EEF1E1O43324 174 aaKnown RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 ITGA5P08648 1049 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 CST2P09228 141 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 INPP1P49441 399 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 AGAP6Q5VW22 663 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 RPUSD3Q6P087 351 aaKnown RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 PRSS45Q7RTY3 260 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 GJC3Q8NFK1 279 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 SMIM4Q8WVI0 70 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 MMP28Q9H239 520 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 ZNF71Q9NQZ8 489 aaPredicted RBP13.78□□□□□ -0.2
CALR-201ENST00000316448 TAS2R4Q9NYW5 299 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 NPAP1Q9NZP6 1156 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 N6AMT1Q9Y5N5 214 aa13.78□□□□□ -0.2
CALR-201ENST00000316448 RPL36A-HNRNPH2H7BZ11 118 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 SLC17A2O00624 439 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 DBHP09172 617 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 ZNF32P17041 273 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 MNDAP41218 407 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 ZNF121P58317 390 aaPredicted RBP13.77□□□□□ -0.21
CALR-201ENST00000316448 GALK2Q01415 458 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 TAF13Q15543 124 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 ZNF57Q68EA5 555 aaPredicted RBP13.77□□□□□ -0.21
CALR-201ENST00000316448 SYNPRQ8TBG9 265 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 ZNF224Q9NZL3 707 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 PTPRQQ9UMZ3 2332 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 BSNQ9UPA5 3926 aa13.77□□□□□ -0.21
CALR-201ENST00000316448 A0A1B0GTI1 187 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 KRT33AO76009 404 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 CTSSP25774 331 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 CX3CR1P49238 355 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 DGCR2P98153 550 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 SLC36A2Q495M3 483 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 UBE2J2Q8N2K1 259 aa13.76□□□□□ -0.21
CALR-201ENST00000316448 Q8NA96 180 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms