RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TMEM225BP0DP42 221 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 P2RY2P41231 377 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 IMMP2LQ96T52 175 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 MBOAT4Q96T53 435 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 ZNF649Q9BS31 505 aa3.66□□□□□ -1.82
USH2A-201ENST00000307340 A0A087WUJ7 227 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 ZNF814B7Z6K7 855 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 RRP8O43159 456 aaKnown RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 HPP00738 406 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 FGF2P09038 288 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OR8U8P0C7N1 319 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 GLYATL3Q5SZD4 288 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SAXO1Q8IYX7 474 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OR4A16Q8NH70 328 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 PELI1Q96FA3 418 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SLC35B3Q9H1N7 401 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SSUH2Q9Y2M2 353 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 CACNA1IQ9P0X4 2223 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 TRAV6A0A075B6T7 132 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 LOC390937A0A1W2PQ73 354 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 EDIL3O43854 480 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 LRP11Q86VZ4 500 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OR2D3Q8NGH3 330 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 GPX7Q96SL4 187 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 SLC45A2Q9UMX9 530 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 KCNK6Q9Y257 313 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 BOLA1Q9Y3E2 137 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SNX11Q9Y5W9 270 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 NPTNQ9Y639 398 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 C5orf67F2Z3F1 127 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 MBTPS2O43462 519 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 MELTFP08582 738 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SLC25A6P12236 298 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 KCNMB1Q16558 191 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SMUG1Q53HV7 270 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SLC25A42Q86VD7 318 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 H1FOOQ8IZA3 346 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 SUMF1Q8NBK3 374 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 DNAJA3Q96EY1 480 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SENP5Q96HI0 755 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 THAP10Q9P2Z0 257 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 ARL2-SNX15V9GYD0 113 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 BCL2L11O43521 198 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SNRPD2P62316 118 aaKnown RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 ZNF836Q6ZNA1 936 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 ZNF680Q8NEM1 530 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OR5AK3PQ8NH89 298 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OTOSQ8NHW6 89 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 HMGB4Q8WW32 186 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 TOE1Q96GM8 510 aaKnown RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 MAGEB1P43366 347 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 CARD18P57730 90 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 MS4A2Q01362 244 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 Q6AWC8 147 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 C11orf87Q6NUJ2 197 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 CALHM3Q86XJ0 350 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 IL22RA1Q8N6P7 574 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 CRB3Q9BUF7 120 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 ANGPTL4Q9BY76 406 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 TP63Q9H3D4 680 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 ST3GAL6Q9Y274 331 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 ZNF891A8MT65 544 aaPredicted RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 SEC11BP0C7V7 166 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 CAPZBP47756 277 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 VAX1Q5SQQ9 334 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 OR6K2Q8NGY2 324 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 SLIRPQ9GZT3 109 aaKnown RBP3.65□□□□□ -1.82
USH2A-201ENST00000307340 TMEM167BQ9NRX6 74 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 PITPNC1Q9UKF7 332 aa3.65□□□□□ -1.82
USH2A-201ENST00000307340 TRAV18A0A075B6X5 111 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SOX14O95416 240 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 NME1P15531 152 aaKnown RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 CXCL12P48061 93 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 CLDN6P56747 220 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TMEM211Q6ICI0 200 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 H2BFWTQ7Z2G1 175 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SLC35E3Q7Z769 313 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 DCBLD1Q8N8Z6 715 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ZCCHC10Q8TBK6 192 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TMEM140Q9NV12 185 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 RBMX2Q9Y388 322 aaKnown RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PQ09 198 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ZNF728P0DKX0 622 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 CD1CP29017 333 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 DHRS7BQ6IAN0 325 aaPredicted RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 CCDC74AQ96AQ1 378 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 POM121L2Q96KW2 1035 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 CCDC74BQ96LY2 380 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 AAMDCQ9H7C9 122 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TAAR3PQ9P1P4 343 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 MTFP1Q9UDX5 166 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PLEKHB1Q9UF11 243 aaPredicted RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 PMF1-BGLAPU3KQ54 211 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ALPK3Q96L96 1907 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 NRARPQ7Z6K4 114 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ZNF610Q8N9Z0 462 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TVP23CQ96ET8 276 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 MSLNLQ96KJ4 702 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms