RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OTX2P32243 289 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 ZNF117Q03924 483 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 ZNF141Q15928 474 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 C1QL3Q5VWW1 255 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 TRILQ7L0X0 811 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 HGDQ93099 445 aa11.97□□□□□ -0.49
DDX54-201ENST00000306014 NXT1Q9UKK6 140 aaKnown RBP11.97□□□□□ -0.49
DDX54-201ENST00000306014 PTRH2Q9Y3E5 179 aaKnown RBP11.97□□□□□ -0.49
DDX54-201ENST00000306014 PTP4A3O75365 173 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 IGF2P01344 180 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 CD226Q15762 336 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 ETFDHQ16134 617 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 OR11G2Q8NGC1 345 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 RNF128Q8TEB7 428 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.96□□□□□ -0.49
DDX54-201ENST00000306014 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 ANKRD9Q96BM1 317 aaPredicted RBP11.96□□□□□ -0.49
DDX54-201ENST00000306014 PGLYRP3Q96LB9 341 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 PCDHGA5Q9Y5G8 931 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 HTR5AP47898 357 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
DDX54-201ENST00000306014 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 WWTR1Q9GZV5 400 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 ZFP64Q9NPA5 681 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 PIGLQ9Y2B2 252 aa11.96□□□□□ -0.49
DDX54-201ENST00000306014 FRG2CA6NGY1 282 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 OR6C65A6NJZ3 312 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 PHF1O43189 567 aaPredicted RBP11.96□□□□□ -0.5
DDX54-201ENST00000306014 NME2P1O60361 137 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.5
DDX54-201ENST00000306014 SYNGR4O95473 234 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 CELA2BP08218 269 aaPredicted RBP11.96□□□□□ -0.5
DDX54-201ENST00000306014 CTLA4P16410 223 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 S100PP25815 95 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 CD96P40200 585 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 APOBEC1P41238 236 aaKnown RBP11.96□□□□□ -0.5
DDX54-201ENST00000306014 ALDH3B1P43353 468 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 RIN1Q13671 783 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 BPHLQ86WA6 291 aaPredicted RBP11.96□□□□□ -0.5
DDX54-201ENST00000306014 SECTM1Q8WVN6 248 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 ASB13Q8WXK3 278 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 NINJ1Q92982 152 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 OR6C1Q96RD1 312 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 TCEAL7Q9BRU2 100 aa11.96□□□□□ -0.5
DDX54-201ENST00000306014 GJE1A6NN92 205 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 CYR61O00622 381 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 HSPB6O14558 160 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SHOXO15266 292 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 MPZL1O95297 269 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 C9orf135Q5VTT2 229 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 Q6ZRG5 221 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 BATF2Q8N1L9 274 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 TERB2Q8NHR7 220 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 C12orf57Q99622 126 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 OR4C45A6NMZ5 311 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 BPNT1O95861 308 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 TK1P04183 234 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 QDPRP09417 244 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 OR13C7P0DN81 318 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 CXCL2P19875 107 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 BVESQ8NE79 360 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 VSTM2LQ96N03 204 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 CTSFQ9UBX1 484 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 ZNF223Q9UK11 482 aaPredicted RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 MMP17Q9ULZ9 603 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 PATJQ8NI35 1801 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 IFNA1P01562 189 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 COL9A1P20849 921 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 LAP3P28838 519 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 OPRM1P35372 400 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 EFNB2P52799 333 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 UBE2KP61086 200 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SMAD4Q13485 552 aaKnown RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 DOK3Q7L591 496 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 TMEM217Q8N7C4 229 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 APOBEC4Q8WW27 367 aaKnown RBP11.95□□□□□ -0.5
DDX54-201ENST00000306014 OR5B12Q96R08 314 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 NMNAT2Q9BZQ4 307 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 CHST6Q9GZX3 395 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 OR51B6Q9H340 312 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SPTY2D1-AS1A0A0U1RR47 76 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 EPPINO95925 133 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 DPP4P27487 766 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 FCGR2CP31995 323 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 SLC35A1P78382 337 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 OR5L1Q8NGL2 311 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 LDAHQ9H6V9 325 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 FANCFQ9NPI8 374 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
DDX54-201ENST00000306014 ZMIZ1Q9ULJ6 1067 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms