RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 MSR1P21757 451 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 FKBP2P26885 142 aaKnown RBP10.04□□□□□ -0.8
SCG2-201ENST00000305409 C9orf135Q5VTT2 229 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 FAM166AQ6J272 317 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 ACBD4Q8NC06 268 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 OR2M7Q8NG81 312 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 NABP1Q96AH0 204 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 FBXO17Q96EF6 278 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 UTP23Q9BRU9 249 aaKnown RBP10.04□□□□□ -0.8
SCG2-201ENST00000305409 GPR87Q9BY21 358 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 FLVCR1Q9Y5Y0 555 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 GVINP1Q7Z2Y8 2422 aa10.04□□□□□ -0.8
SCG2-201ENST00000305409 A0A1B0GVI7 797 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 ARGFXA6NJG6 315 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 CTDSPLO15194 276 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 XRCC3O43542 346 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 B4GALT1P15291 398 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 PSMA6P60900 246 aaKnown RBP10.03□□□□□ -0.8
SCG2-201ENST00000305409 SF3B4Q15427 424 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCG2-201ENST00000305409 FCN2Q15485 313 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 ANKRD16Q6P6B7 361 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 HDDC2Q7Z4H3 204 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 GALNTL5Q7Z4T8 443 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 OR2V1Q8NHB1 315 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 TMEM54Q969K7 222 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 PHF21AQ96BD5 680 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 ZNF486Q96H40 463 aaPredicted RBP10.03□□□□□ -0.8
SCG2-201ENST00000305409 CIB4A0PJX0 185 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 C21orf140B9A014 251 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 HLA-DMAP28067 261 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 MRPS15P82914 257 aaKnown RBP10.03□□□□□ -0.8
SCG2-201ENST00000305409 RSPO1Q2MKA7 263 aaPredicted RBP10.03□□□□□ -0.8
SCG2-201ENST00000305409 PCGF3Q3KNV8 242 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 SFRP5Q5T4F7 317 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 BAIAP2L2Q6UXY1 529 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 TMPRSS7Q7RTY8 843 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 CMTM3Q96MX0 182 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 NELFAQ9H3P2 528 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 PLEK2Q9NYT0 353 aa10.03□□□□□ -0.8
SCG2-201ENST00000305409 FOXD3Q9UJU5 478 aaPredicted RBP10.03□□□□□ -0.8
SCG2-201ENST00000305409 CEP250Q9BV73 2442 aa10.02□□□□□ -0.8
SCG2-201ENST00000305409 GJE1A6NN92 205 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 VAMP5O95183 116 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 BDKRB2P30411 391 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 RRAS2P62070 204 aaPredicted RBP10.02□□□□□ -0.81
SCG2-201ENST00000305409 ZNF813Q6ZN06 617 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 AAED1Q7RTV5 226 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 OR1M1Q8NGA1 313 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 OR5D18Q8NGL1 313 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 ADGRG7Q96K78 797 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 DIABLOQ9NR28 239 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 PAQR5Q9NXK6 330 aaPredicted RBP10.02□□□□□ -0.81
SCG2-201ENST00000305409 CSAG2Q9Y5P2 127 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 MYO7BQ6PIF6 2116 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 ZNF292O60281 2723 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 ZNF716A6NP11 495 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 ACOT7O00154 380 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 HPXP02790 462 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 ZNF20P17024 532 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 FSTP19883 344 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 VEGFCP49767 419 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 GFRA1P56159 465 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 IFITM2Q01629 132 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
SCG2-201ENST00000305409 LINC00303Q3SY05 128 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 C20orf196Q8IYI0 205 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 CLEC1AQ8NC01 280 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 GIMAP1Q8WWP7 306 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 PGAM5Q96HS1 289 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 LYZL4Q96KX0 146 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 BOKQ9UMX3 212 aaPredicted RBP10.02□□□□□ -0.81
SCG2-201ENST00000305409 CACNA1GO43497 2377 aa10.02□□□□□ -0.81
SCG2-201ENST00000305409 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 A0A1W2PP11 408 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
SCG2-201ENST00000305409 NKX2-8O15522 239 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 FTH1P19P0C7X4 201 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 NAT2P11245 290 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 CXCL3P19876 107 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 PLGLB1Q02325 96 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 ST3GAL2Q16842 350 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 ZNF774Q6NX45 483 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 OR2AE1Q8NHA4 323 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 KCNE4Q8WWG9 221 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 AKAP1Q92667 903 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCG2-201ENST00000305409 MRI1Q9BV20 369 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 TTTY12Q9BZ98 90 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 C20orf85Q9H1P6 137 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
SCG2-201ENST00000305409 NUBP2Q9Y5Y2 271 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 SVILO95425 2214 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 ANKRD20A5PA0PJZ0 165 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 TMEM235A6NFC5 223 aa10.01□□□□□ -0.81
SCG2-201ENST00000305409 RBBP9O75884 186 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms