RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 OR6C6A6NF89 314 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 SDCBPO00560 298 aaPredicted RBP17.44■□□□□ 0.38
TSR1-201ENST00000301364 HTD2P86397 168 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 KCNJ15Q99712 375 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 DLL4Q9NR61 685 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 ANKUB1A6NFN9 424 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 LMO7DNF2Z398 122 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 RGS13O14921 159 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 GUSBP08236 651 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 OR2G3Q8NGZ4 309 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 PLEKHF2Q9H8W4 249 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 FLVCR1Q9Y5Y0 555 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 UBE2IP63279 158 aaKnown RBP17.44■□□□□ 0.38
TSR1-201ENST00000301364 GUCA2AQ02747 115 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 SHBQ15464 509 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 OR1N1Q8NGS0 311 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 OIT3Q8WWZ8 545 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 A0A0U1RQK1 487 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 AQP8O94778 261 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 CLDN1O95832 211 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 HPNP05981 417 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 RPL12P30050 165 aaKnown RBP17.44■□□□□ 0.38
TSR1-201ENST00000301364 FCGR2CP31995 323 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 AKR1C1Q04828 323 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 WDR38Q5JTN6 314 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 ANKRD16Q6P6B7 361 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 SUMF1Q8NBK3 374 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 OR5V1Q9UGF6 321 aa17.44■□□□□ 0.38
TSR1-201ENST00000301364 ZNF705FA8MVS1 300 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 ZNF705DP0CH99 300 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 ZNF705BP0CI00 300 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 BCKDHBP21953 392 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 MAGEB1P43366 347 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 TMEM128Q5BJH2 165 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 LHFPL2Q6ZUX7 228 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 HIST2H3AQ71DI3 136 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 ZNF707Q96C28 371 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 NUDT9Q9BW91 350 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 OR2W5A6NFC9 320 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 LGALS8O00214 317 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 HOXB3P14651 431 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSR1-201ENST00000301364 OR51F2Q8NH61 342 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 MIXL1Q9H2W2 232 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 FBXO34Q9NWN3 711 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 B3GAT1Q9P2W7 334 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 ATAD5Q96QE3 1844 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 COL11A2P13942 1736 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 E5RGE8 158 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 NXPH2O95156 264 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 ZGLP1P0C6A0 271 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 GABRG2P18507 467 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 PHF7Q9BWX1 381 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 NSG2Q9Y328 171 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 MVDP53602 400 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 DEGS2Q6QHC5 323 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 UBE3DQ7Z6J8 389 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 CCDC71Q8IV32 467 aaPredicted RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 C14orf79Q96F83 325 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 LRRC61Q9BV99 259 aa17.43■□□□□ 0.38
TSR1-201ENST00000301364 STRAPQ9Y3F4 350 aaKnown RBP17.43■□□□□ 0.38
TSR1-201ENST00000301364 A0A087WZY1 265 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 C17orf107Q6ZR85 190 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 INTS12Q96CB8 462 aaKnown RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 C10orf90Q96M02 699 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 CD80P33681 288 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 OTPQ5XKR4 325 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 PTCRAQ6ISU1 281 aaPredicted RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 C11orf87Q6NUJ2 197 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 BRICD5Q6PL45 260 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 ZDHHC22Q8N966 263 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 BARHL1Q9BZE3 327 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 C12orf10Q9HB07 376 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 MRPS18AQ9NVS2 196 aaKnown RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 CYB5R1Q9UHQ9 305 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 PURGQ9UJV8 347 aaKnown RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 SERPINE3A8MV23 424 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 SHOXO15266 292 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 CASP6P55212 293 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 LANCL3Q6ZV70 420 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 ZBTB44Q8NCP5 570 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 CTDSPLO15194 276 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 INHBBP09529 407 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 H2AFB1P0C5Y9 115 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 OR5H8P0DN80 308 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 TCN2P20062 427 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 TAGLN2P37802 199 aaKnown RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 PRSS41Q7RTY9 318 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 APH1AQ96BI3 265 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 RAB39BQ96DA2 213 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 GNPNAT1Q96EK6 184 aaPredicted RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 NXF2Q9GZY0 626 aaKnown RBP17.42■□□□□ 0.38
TSR1-201ENST00000301364 GNG12Q9UBI6 72 aa17.42■□□□□ 0.38
TSR1-201ENST00000301364 BHLHE40O14503 412 aa17.41■□□□□ 0.38
TSR1-201ENST00000301364 OGG1O15527 345 aa17.41■□□□□ 0.38
TSR1-201ENST00000301364 KITLGP21583 273 aa17.41■□□□□ 0.38
TSR1-201ENST00000301364 FOXF1Q12946 379 aa17.41■□□□□ 0.38
TSR1-201ENST00000301364 MPPED2Q15777 294 aa17.41■□□□□ 0.38
TSR1-201ENST00000301364 C1orf53Q5VUE5 145 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms