RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 OR5L1Q8NGL2 311 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 HAVCR1Q96D42 359 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 HRASLS5Q96KN8 279 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 TTTY10Q9BZA0 68 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 TUBG2Q9NRH3 451 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 GPR160Q9UJ42 338 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
VPS28-201ENST00000292510 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 TLN2Q9Y4G6 2542 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 PSMD9O00233 223 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 LILRA1O75019 489 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 H2BFMP0C1H6 154 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 RAC2P15153 192 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 ALOX5APP20292 161 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 KITLGP21583 273 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 COL8A2P25067 703 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 PEX2P28328 305 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 HSD11B1P28845 292 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 SLC15A1P46059 708 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
VPS28-201ENST00000292510 HNRNPA0Q13151 305 aaKnown RBP11.38□□□□□ -0.59
VPS28-201ENST00000292510 GGTLC2Q14390 218 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 GK2Q14410 553 aaPredicted RBP11.38□□□□□ -0.59
VPS28-201ENST00000292510 SPRNQ5BIV9 151 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 Q6ZR03 302 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 USP51Q70EK9 711 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 GALNT4Q8N4A0 578 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 OR51G2Q8NGK0 314 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 OR8J1Q8NGP2 316 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 OR2AE1Q8NHA4 323 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 UBASH3BQ8TF42 649 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 ZNF582Q96NG8 517 aaPredicted RBP11.38□□□□□ -0.59
VPS28-201ENST00000292510 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
VPS28-201ENST00000292510 YIPF3Q9GZM5 350 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 ADGRL4Q9HBW9 690 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 IMPAD1Q9NX62 359 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 LAMP5Q9UJQ1 280 aa11.38□□□□□ -0.59
VPS28-201ENST00000292510 A0A096LNT2 108 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 DLGAP1O14490 977 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 TPD52L2O43399 206 aaKnown RBP11.37□□□□□ -0.59
VPS28-201ENST00000292510 TBX1O43435 398 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 CDC14BO60729 498 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 APOL3O95236 402 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 MT-ND5P03915 603 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
VPS28-201ENST00000292510 CSF3P09919 207 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 FOSL1P15407 271 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 RBMXP38159 391 aaKnown RBP11.37□□□□□ -0.59
VPS28-201ENST00000292510 ELF3P78545 371 aaPredicted RBP11.37□□□□□ -0.59
VPS28-201ENST00000292510 ZNF92Q03936 586 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 MALLQ13021 153 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 GID4Q8IVV7 300 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 BHLHE23Q8NDY6 225 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 BPESC1Q9GZL8 116 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 MYOZ1Q9NP98 299 aaPredicted RBP11.37□□□□□ -0.59
VPS28-201ENST00000292510 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 DECR2Q9NUI1 292 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
VPS28-201ENST00000292510 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 VWC2LB2RUY7 222 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 ENTPD6O75354 484 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 SBK2P0C263 348 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 SLC25A16P16260 332 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 HTR1FP30939 366 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 PGAP1Q75T13 922 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 MRPL21Q7Z2W9 205 aaKnown RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 SLC35F2Q8IXU6 374 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 OR2Z1Q8NG97 314 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 RDH5Q92781 318 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 TBX5Q99593 518 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 SAP30LQ9HAJ7 183 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 CYSLTR2Q9NS75 346 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 FAM118AQ9NWS6 357 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 NKIRAS2Q9NYR9 191 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 ZNF319Q9P2F9 582 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 CGGBP1Q9UFW8 167 aaPredicted RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 WARS2Q9UGM6 360 aaKnown RBP11.36□□□□□ -0.59
VPS28-201ENST00000292510 LRP12Q9Y561 859 aa11.36□□□□□ -0.59
VPS28-201ENST00000292510 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms