RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TTTY12Q9BZ98 90 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF436Q9C0F3 470 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-201ENST00000292476 ELOVL3Q9HB03 270 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 GPN1Q9HCN4 374 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-201ENST00000292476 B3GAT1Q9P2W7 334 aa14.89□□□□□ -0.03
CPSF4-201ENST00000292476 PINLYPA6NC86 204 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 ZNF726A6NNF4 738 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 H7C417 338 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 SLC17A2O00624 439 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 SLC16A7O60669 478 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 NDUFB6O95139 128 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 IGHG1P01857 330 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 CSF1P09603 554 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 CD37P11049 281 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 HLA-DOBP13765 273 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 DNASE1P24855 282 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 MEOX1P50221 254 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 BIDP55957 195 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 GFRA1P56159 465 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 MELKQ14680 651 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 WIPI1Q5MNZ9 446 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-201ENST00000292476 THEM4Q5T1C6 240 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-201ENST00000292476 GLB1L2Q8IW92 636 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 ZFP62Q8NB50 900 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-201ENST00000292476 RELTQ969Z4 430 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 SLC25A44Q96H78 314 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-201ENST00000292476 KCNK17Q96T54 332 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 MTFP1Q9UDX5 166 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 SLC23A1Q9UHI7 598 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 CHD6Q8TD26 2715 aa14.88□□□□□ -0.03
CPSF4-201ENST00000292476 HLA-DQA2P01906 255 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 C4BPBP20851 252 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 ENPP1P22413 925 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 TNFSF10P50591 281 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 RIDAP52758 137 aaKnown RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 ZP1P60852 638 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 RAB11BQ15907 218 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 MEP1BQ16820 701 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 DEFB109BQ30KR1 87 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 SFRP4Q6FHJ7 346 aaPredicted RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 FAM166AQ6J272 317 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 TEX261Q6UWH6 196 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 SERPINA12Q8IW75 414 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 FDCSPQ8NFU4 85 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 OR2V1Q8NHB1 315 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 ANGPTL6Q8NI99 470 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 TSEN15Q8WW01 171 aaKnown RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 CPNE4Q96A23 557 aaPredicted RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 DACT3Q96B18 629 aaPredicted RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 NOX3Q9HBY0 568 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 ACKR4Q9NPB9 350 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 MRPL22Q9NWU5 206 aaKnown RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 KLK11Q9UBX7 282 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 U3KQ87 197 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 A0A0J9YW62 118 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 GGT3PA6NGU5 568 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 NPIPA2E9PIF3 369 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 NPIPA3F8WFD2 350 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 EIF1AYO14602 144 aaKnown RBP14.87□□□□□ -0.03
CPSF4-201ENST00000292476 TNFSF11O14788 317 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 ICMTO60725 284 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 CEACAM4O75871 244 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 RBBP9O75884 186 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 HPXP02790 462 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 VEGFCP49767 419 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 CLRN1P58418 232 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 DHODHQ02127 395 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 TMEM255AQ5JRV8 349 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 MTFR2Q6P444 385 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 NHLRC1Q6VVB1 395 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 CATSPERDQ86XM0 798 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 OR11H4Q8NGC9 324 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 OR8H1Q8NGG4 311 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 EXTL1Q92935 676 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 PNPLA2Q96AD5 504 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 SORCS2Q96PQ0 1159 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 AMELYQ99218 206 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 KCNMB2Q9Y691 235 aa14.87□□□□□ -0.03
CPSF4-201ENST00000292476 FAM208BQ5VWN6 2430 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 ATMQ13315 3056 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 TRAV17A0A0B4J275 112 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 LOC100289279A0A1B0GTE1 492 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 LINC00862A6NCI5 91 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 SULT1C2O00338 296 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 ARPC1BO15143 372 aaKnown RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 TRAF3IP2O43734 574 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 CREBL2O60519 120 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 NOS1APO75052 506 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 CTAG2O75638 210 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 MAS1P04201 325 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 CD2P06729 351 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 GIPP09681 153 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 CAPZA1P52907 286 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 PPIAP62937 165 aaKnown RBP14.86□□□□□ -0.03
CPSF4-201ENST00000292476 SLC10A1Q14973 349 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 TMEM251Q8N6I4 163 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 OR10AC1Q8NH08 325 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 OR52N5Q8NH56 324 aa14.86□□□□□ -0.03
CPSF4-201ENST00000292476 MARVELD3Q96A59 401 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms