RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FCRL6Q6DN72 434 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 OR8U1Q8NH10 309 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 CENPFP49454 3210 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 A0A0B4J2E0 115 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 A0A1B0GX12 115 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF217O75362 1048 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 ADRA2AP08913 450 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 CXCL3P19876 107 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 AVPR2P30518 371 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 FCGR2CP31995 323 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 MFGE8Q08431 387 aaPredicted RBP11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 TMEM92Q6UXU6 159 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 TMPRSS11FQ6ZWK6 438 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 BSCL2Q96G97 398 aaPredicted RBP11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
SLC6A1-201ENST00000287766 PATJQ8NI35 1801 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 BTBD17A6NE02 478 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 HOXB9P17482 250 aaPredicted RBP11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 LIMS1P48059 325 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 PDLIM3Q53GG5 364 aaPredicted RBP11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 LCN15Q6UWW0 184 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 EVA1AQ9H8M9 152 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 FLRT3Q9NZU0 649 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 MYLKQ15746 1914 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 MDFIC2A0A1B0GVS7 189 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 F10P00742 488 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 TK1P04183 234 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 BIDP55957 195 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 RAB31Q13636 194 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 NCMAPQ5T1S8 102 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 WDR88Q6ZMY6 472 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 C16orf47Q6ZP98 133 aaPredicted RBP11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 OR14L1PQ8NHC6 308 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 CHAC2Q8WUX2 184 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 MED29Q9NX70 200 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 TAS2R4Q9NYW5 299 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 JTBO76095 146 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 ALOX5APP20292 161 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 NTF3P20783 257 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 TBXA2RP21731 343 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 DPP4P27487 766 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 COTL1Q14019 142 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 PRICKLE4Q2TBC4 344 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 OVCH1Q7RTY7 1134 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 RFLNBQ8N5W9 214 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 DDIT4LQ96D03 193 aa11.35□□□□□ -0.59
SLC6A1-201ENST00000287766 TRAV36DV7A0A075B6V5 113 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 CDK2AP1O14519 115 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF749O43361 778 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 GABRG2P18507 467 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 KCNJ3P48549 501 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 POLR2HP52434 150 aaKnown RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 TMEM176BQ3YBM2 270 aaPredicted RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 OR56B1Q8NGI3 324 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 OR4C16Q8NGL9 310 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 HSD17B8Q92506 261 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 SLC46A1Q96NT5 459 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 BANF2Q9H503 90 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 CACNA1EQ15878 2313 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF727A8MUV8 499 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 RNASEK-C17orf49H0YIS7 233 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 AKR7A3O95154 331 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 MT-CO2P00403 227 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 RAC2P15153 192 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 HSD17B7P56937 341 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 EEF1A1P68104 462 aaKnown RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 RPUSD3Q6P087 351 aaKnown RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 NHLRC1Q6VVB1 395 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 ANGPTL5Q86XS5 388 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 LRRC18Q8N456 261 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 OR51A4Q8NGJ6 313 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 NT5CQ8TCD5 201 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 PHYHIPQ92561 330 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 MOGAT1Q96PD6 335 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 PLK3Q9H4B4 646 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 SLCO1C1Q9NYB5 712 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 HAO2Q9NYQ3 351 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 FBXO4Q9UKT5 387 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 MRPS28Q9Y2Q9 187 aaKnown RBP11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 MED12Q93074 2177 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 PIGBOS1A0A0B4J2F0 54 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
SLC6A1-201ENST00000287766 SULT2B1O00204 365 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms