RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 H3BSH0 61 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 MTRF1O75570 445 aaKnown RBP16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 GP1BAP07359 652 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 C17orf67Q0P5P2 114 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 FAM74A3Q4VXF1 159 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 NUP54Q7Z3B4 507 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 PM20D2Q8IYS1 436 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 OR8B4Q96RC9 309 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 HPF1Q9NWY4 346 aa16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 KLF2Q9Y5W3 355 aaPredicted RBP16.32■□□□□ 0.2
PDLIM3-201ENST00000284767 A8MVM7 634 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 AMY2AP04746 511 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 HLA-DOBP13765 273 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 CD34P28906 385 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 PTGDSP41222 190 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 LUMP51884 338 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 RPS18P62269 152 aaKnown RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 FOXF1Q12946 379 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 TRA2AQ13595 282 aaKnown RBP eCLIP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 ATPAF1Q5TC12 328 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 ELP2Q6IA86 826 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 OR1J4Q8NGS1 313 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 SLC25A28Q96A46 364 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 H3BML4 177 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 CD74P04233 296 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 FBXO45P0C2W1 286 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 DHRS2Q13268 280 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 MAMDC2Q7Z304 686 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 OR1J2Q8NGS2 313 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 ASB17Q8WXJ9 295 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 WDR13Q9H1Z4 485 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 KCNK7Q9Y2U2 307 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 HS3ST3B1Q9Y662 390 aa16.31■□□□□ 0.2
PDLIM3-201ENST00000284767 A0A0A6YYH2 397 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ANKUB1A6NFN9 424 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 A6NJ64 397 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ACP1P24666 158 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 CTAG1AP78358 180 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 SLC17A1Q14916 467 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 PAN3Q58A45 887 aaKnown RBP16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ACOT7LQ6ZUV0 252 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 OR2W3Q7Z3T1 314 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 GALNT16Q8N428 558 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 AMELYQ99218 206 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 TINAGL1Q9GZM7 467 aaPredicted RBP16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 METTL7AQ9H8H3 244 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 WDR54Q9H977 334 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ELOVL3Q9HB03 270 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 KCNG2Q9UJ96 466 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 IGHV1-45A0A0A0MS14 117 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 DOK2O60496 412 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 CYB5AP00167 134 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 H2AFB1P0C5Y9 115 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF735P0CB33 412 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ACKR1Q16570 336 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 LRRC69Q6ZNQ3 347 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 ELP5Q8TE02 316 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 PPP4R1LQ9P1A2 415 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 CKLFQ9UBR5 152 aa16.3■□□□□ 0.2
PDLIM3-201ENST00000284767 COL27A1Q8IZC6 1860 aaPredicted RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 AHCTF1Q8WYP5 2266 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF736B4DX44 427 aaPredicted RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 M0QYG6 137 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 EFNA2O43921 213 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 COX6A1P12074 109 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 HTR2CP28335 458 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 TEX30Q5JUR7 227 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 TMEM225Q6GV28 225 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 ASPHD2Q6ICH7 369 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 TMEM185AQ8NFB2 350 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 RNF128Q8TEB7 428 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 PDCD10Q9BUL8 212 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF471Q9BX82 626 aaPredicted RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 DHDHQ9UQ10 334 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 CACNA1HO95180 2353 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 RAB19A4D1S5 217 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 ATG12O94817 140 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 CD37P11049 281 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 HLA-GP17693 338 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 SNTB1Q13884 538 aaKnown RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 SGCBQ16585 318 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 MEP1BQ16820 701 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 DBX2Q6ZNG2 339 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 MISPQ8IVT2 679 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 WDFY1Q8IWB7 410 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF679Q8IYX0 411 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 PLPP7Q8NBV4 271 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 NDRG3Q9UGV2 375 aa16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 NOP16Q9Y3C1 178 aaKnown RBP16.29■□□□□ 0.2
PDLIM3-201ENST00000284767 RNF222A6NCQ9 220 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 C9J4A7 227 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 AHSA1O95433 338 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 AVPR2P30518 371 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 DLSTP36957 453 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 OR7A5Q15622 319 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms