RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FMO3P31513 532 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-201ENST00000275036 CBX1P83916 185 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
HMGN3-201ENST00000275036 SNAI3Q3KNW1 292 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 ACSM5Q6NUN0 579 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF283Q8N7M2 679 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 PAPD5Q8NDF8 572 aaKnown RBP12.17□□□□□ -0.46
HMGN3-201ENST00000275036 BHLHE23Q8NDY6 225 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 TIMD4Q96H15 378 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 SLC30A2Q9BRI3 323 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 DDX28Q9NUL7 540 aaKnown RBP12.17□□□□□ -0.46
HMGN3-201ENST00000275036 TMEM106BQ9NUM4 274 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 NPTNQ9Y639 398 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 RIIAD1A6NNX1 92 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 H3BN98 237 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF593O00488 134 aaPredicted RBP12.16□□□□□ -0.46
HMGN3-201ENST00000275036 PLPP2O43688 288 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 IFNGP01579 166 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 SPARCP09486 303 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF3P17036 446 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 TNFSF4P23510 183 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 GRK5P34947 590 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 ENTPD1P49961 510 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 TPTEP56180 551 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 OR6K6Q8NGW6 343 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 OR51F2Q8NH61 342 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 ST7LQ8TDW4 575 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
HMGN3-201ENST00000275036 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 NTN4Q9HB63 628 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
HMGN3-201ENST00000275036 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 A0A1B0GWJ7 208 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 ISPDA4D126 451 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 F5H5P2 479 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 E2F6O75461 281 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 HLA-DPB1P04440 258 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 SELEP16581 610 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 POU1F1P28069 291 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
HMGN3-201ENST00000275036 MMP16P51512 607 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 GINS1Q14691 196 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 OR13G1Q8NGZ3 307 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.46
HMGN3-201ENST00000275036 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 MEGF10Q96KG7 1140 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
HMGN3-201ENST00000275036 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 TIPRLO75663 272 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SBK2P0C263 348 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SLC2A1P11166 492 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 OSMP13725 252 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SLC6A9P48067 706 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 PRKXP51817 358 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 CDK5Q00535 292 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF92Q03936 586 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 GLYATL3Q5SZD4 288 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SLC27A4Q6P1M0 643 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 DPY19L4Q7Z388 723 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
HMGN3-201ENST00000275036 SPTSSAQ969W0 71 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
HMGN3-201ENST00000275036 OTULINQ96BN8 352 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 AMELYQ99218 206 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 COPS4Q9BT78 406 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 TMPRSS13Q9BYE2 586 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 METTL17Q9H7H0 456 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-201ENST00000275036 MARCH7Q9H992 704 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 CENPMQ9NSP4 180 aa12.14□□□□□ -0.47
HMGN3-201ENST00000275036 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 SURF4O15260 269 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 GLCEO94923 617 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PNPP00491 289 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 ANXA8P13928 327 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 ANPEPP15144 967 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PCMT1P22061 227 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PMELP40967 661 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms