RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CDK5R1Q15078 307 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 SHBQ15464 509 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 MARCH1Q8TCQ1 289 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 ST8SIA1Q92185 356 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 BCL2L10Q9HD36 194 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 A3GALT2U3KPV4 340 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 DFFBO76075 338 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 HLA-HP01893 362 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 FKBP2P26885 142 aaKnown RBP10.38□□□□□ -0.75
USP53-201ENST00000274030 ECI1P42126 302 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 ZNF121P58317 390 aaPredicted RBP10.38□□□□□ -0.75
USP53-201ENST00000274030 SLC17A1Q14916 467 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 H3F3CQ6NXT2 135 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 OR2AE1Q8NHA4 323 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 PLA2G3Q9NZ20 509 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 A0A087WV62 115 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
USP53-201ENST00000274030 S100A7P31151 101 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 DCTDP32321 178 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 GNB2P62879 340 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 SH2D5Q6ZV89 423 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 UBALD1Q8TB05 177 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 GDF2Q9UK05 429 aaPredicted RBP10.38□□□□□ -0.75
USP53-201ENST00000274030 POLDIP2Q9Y2S7 368 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 SPTY2D1-AS1A0A0U1RR47 76 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 A0A1W2PPH5 198 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 PDCD1Q15116 288 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 HLA-BQ31612 363 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SLC25A35Q3KQZ1 300 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 RELL2Q8NC24 303 aaPredicted RBP10.37□□□□□ -0.75
USP53-201ENST00000274030 C14orf79Q96F83 325 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 GABARAPL1Q9H0R8 117 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 S1PR5Q9H228 398 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ISYNA1Q9NPH2 558 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 POMT2Q9UKY4 750 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 RP1P56715 2156 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SPAG17Q6Q759 2223 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ANGPTL7O43827 346 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 LALBAP00709 142 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 FAHP16930 419 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 PNLIPRP2P54317 469 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 NECAP1Q8NC96 275 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ABCD4O14678 606 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ZNF354AO60765 605 aaPredicted RBP10.37□□□□□ -0.75
USP53-201ENST00000274030 FAM53BQ14153 422 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 WDR88Q6ZMY6 472 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.37□□□□□ -0.75
USP53-201ENST00000274030 SARAFQ96BY9 339 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 KTI12Q96EK9 354 aaPredicted RBP10.37□□□□□ -0.75
USP53-201ENST00000274030 TCEAL7Q9BRU2 100 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 NUDT9Q9BW91 350 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 JAM3Q9BX67 310 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 NMES1Q9C002 83 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 KLK11Q9UBX7 282 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 AK3Q9UIJ7 227 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 R4GMQ9 66 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ZFP62Q8NB50 900 aaPredicted RBP10.37□□□□□ -0.75
USP53-201ENST00000274030 FBXW5Q969U6 566 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SARGQ9BW04 601 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 OR5G3P0C626 314 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ARR3P36575 388 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 DDOSTP39656 456 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 BTG1P62324 171 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 AVPI1Q5T686 147 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SPEM1Q8N4L4 309 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 AMER3Q8N944 861 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 OR11G2Q8NGC1 345 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 OR2G2Q8NGZ5 317 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 ST3GAL6Q9Y274 331 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 SLC17A4Q9Y2C5 497 aa10.37□□□□□ -0.75
USP53-201ENST00000274030 AQP7P3A6NL99 342 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 GABRB1P18505 474 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 CD80P33681 288 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 CLEC12BQ2HXU8 276 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 CXorf67Q86X51 503 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 DYNC2LI1Q8TCX1 351 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 FRG2CA6NGY1 282 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 DHHO43323 396 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 SDHBP21912 280 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 EGR3Q06889 387 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 ASAH1Q13510 395 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 CEACAM16Q2WEN9 425 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 FAM122BQ7Z309 247 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 MVB12AQ96EY5 273 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 MRGPRX4Q96LA9 322 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 B9D1Q9UPM9 204 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 A0A0A6YYD5 115 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 A0A1W2PR80 420 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 METTL12A8MUP2 240 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms