RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
SS18-202ENST00000269138 GCH1P30793 250 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 EVX1P49640 407 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 ZNF121P58317 390 aaPredicted RBP10.92□□□□□ -0.66
SS18-202ENST00000269138 ROM1Q03395 351 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 ZNF85Q03923 595 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 PSG7Q13046 419 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 CDK5R2Q13319 367 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 IL18R1Q13478 541 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 IZUMO2Q6UXV1 221 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 RHOUQ7L0Q8 258 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 PRSS45Q7RTY3 260 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 SETD9Q8NE22 299 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 OR2T27Q8NH04 317 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 ASB17Q8WXJ9 295 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 MNTQ99583 582 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 VCX3BQ9H321 246 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 ZNF319Q9P2F9 582 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 MRM2Q9UI43 246 aaKnown RBP10.92□□□□□ -0.66
SS18-202ENST00000269138 IKZF2Q9UKS7 526 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 EXOGQ9Y2C4 368 aaKnown RBP10.92□□□□□ -0.66
SS18-202ENST00000269138 PMF1-BGLAPU3KQ54 211 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 J3QW42 95 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 IGHV4-39P01824 125 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 ANXA2P07355 339 aaKnown RBP10.91□□□□□ -0.66
SS18-202ENST00000269138 NAT2P11245 290 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 PAX1P15863 534 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 ART1P52961 327 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 ATP5J2P56134 94 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 SELENOVP59797 346 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 GLYATL3Q5SZD4 288 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 KCTD18Q6PI47 426 aaPredicted RBP10.91□□□□□ -0.66
SS18-202ENST00000269138 PLEKHG7Q6ZR37 379 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 FAM57BQ71RH2 274 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 C1orf174Q8IYL3 243 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 ZNF679Q8IYX0 411 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 C8orf59Q8N0T1 100 aaPredicted RBP10.91□□□□□ -0.66
SS18-202ENST00000269138 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 OR2AE1Q8NHA4 323 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 HAVCR1Q96D42 359 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 VRK1Q99986 396 aaPredicted RBP10.91□□□□□ -0.66
SS18-202ENST00000269138 GSX2Q9BZM3 304 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 TPK1Q9H3S4 243 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 DYNLRB1Q9NP97 96 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 MYRFQ9Y2G1 1151 aa10.91□□□□□ -0.66
SS18-202ENST00000269138 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 SNTNA6NMZ2 147 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 H7C417 338 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 M0R233 179 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 TBX1O43435 398 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 LY6HO94772 140 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 TUBG1P23258 451 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 ZNF92Q03936 586 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 GK2Q14410 553 aaPredicted RBP10.9□□□□□ -0.66
SS18-202ENST00000269138 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 ZNF684Q5T5D7 378 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 OR2T2Q6IF00 324 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 DEGS2Q6QHC5 323 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 FBXW12Q6X9E4 464 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 THAP5Q7Z6K1 395 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 OR5AS1Q8N127 324 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 OR52I1Q8NGK6 324 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 FBLIM1Q8WUP2 373 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 PPP1R14AQ96A00 147 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 COG8Q96MW5 612 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 SORCS2Q96PQ0 1159 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 FOXC2Q99958 501 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 RHNO1Q9BSD3 238 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 MROQ9BYG7 248 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 TUBG2Q9NRH3 451 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 PURGQ9UJV8 347 aaKnown RBP10.9□□□□□ -0.66
SS18-202ENST00000269138 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.66
SS18-202ENST00000269138 HSPE1-MOB4S4R3N1 261 aa10.9□□□□□ -0.66
SS18-202ENST00000269138 PRRC2AP48634 2157 aaKnown RBP10.9□□□□□ -0.67
SS18-202ENST00000269138 DAPL1A0PJW8 107 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 H3BSA7 217 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 PHYHO14832 338 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 TIMM8AO60220 97 aaPredicted RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 LILRA1O75019 489 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 ZNF254O75437 659 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 PNPP00491 289 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 BMP4P12644 408 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 RAC2P15153 192 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 KITLGP21583 273 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 VHLP40337 213 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 PPOXP50336 477 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 RIDAP52758 137 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 PSMA6P60900 246 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 EGR3Q06889 387 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 MFGE8Q08431 387 aaPredicted RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 KRTAP1-3Q8IUG1 177 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 LRRC75A-AS1Q8N1F1 130 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 ACBD7Q8N6N7 88 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 TRMT61AQ96FX7 289 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 CXXC4Q9H2H0 198 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 NIPAL2Q9H841 368 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 MSL2Q9HCI7 577 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 MRPS18AQ9NVS2 196 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms