RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 LIPCP11150 499 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 RAB11AP62491 216 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 PPIAP62937 165 aaKnown RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 OPN5Q6U736 354 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 Q6ZSR9 355 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 ZNF808Q8N4W9 903 aaPredicted RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 SLC41A2Q96JW4 573 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 TAAR9Q96RI9 348 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 RHBDD3Q9Y3P4 386 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 G3V3Q6 166 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 M0R082 166 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 CTSAP10619 480 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 MMP15P51511 669 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 TGFBR3Q03167 851 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 AARDQ4LEZ3 155 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 TRNP1Q6NT89 227 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 MKXQ8IYA7 352 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 METTL27Q8N6F8 245 aaPredicted RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 TRMT61AQ96FX7 289 aaKnown RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 SENP5Q96HI0 755 aaPredicted RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 NOX4Q9NPH5 578 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 TRAPPC2LH3BP13 241 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 SLCO2B1O94956 709 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 AADACP22760 399 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 TACR3P29371 465 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
VCAN-201ENST00000265077 DLEU7Q6UYE1 221 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 PRSS16Q9NQE7 514 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 FLVCR2Q9UPI3 526 aa5.22□□□□□ -1.57
VCAN-201ENST00000265077 PRAMEF26H0Y7S4 382 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 RAB27BO00194 218 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 OR10J4P0C629 311 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 HIST1H1BP16401 226 aaKnown RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 TBPP20226 339 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 ZNF93P35789 620 aaPredicted RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 PAX5Q02548 391 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 LCN10Q6JVE6 187 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 VHLLQ6RSH7 139 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 OVCH1Q7RTY7 1134 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 GALNT16Q8N428 558 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 SLC22A24Q8N4F4 322 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 ISOC2Q96AB3 205 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 DAZAP1Q96EP5 407 aaKnown RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 C19orf43Q9BQ61 176 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 CYSLTR2Q9NS75 346 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 LHX3Q9UBR4 397 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 HEPACAM2A8MVW5 462 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 M0R1X1 148 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 UBE2CO00762 179 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 FRS3O43559 492 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 NUDT21O43809 227 aaKnown RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 TIMP2P16035 220 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 DRD1P21728 446 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 RPS15P62841 145 aaKnown RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 GAB1Q13480 694 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 TMEM25Q86YD3 366 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 SLC39A11Q8N1S5 342 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 OR4A4PQ8NGN8 299 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 GPR174Q9BXC1 333 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 RIMS4Q9H426 269 aaPredicted RBP5.21□□□□□ -1.57
VCAN-201ENST00000265077 PRSS21Q9Y6M0 314 aa5.21□□□□□ -1.57
VCAN-201ENST00000265077 NPIPB9F8W1W9 429 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 CALCBP10092 127 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR7A5Q15622 319 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 SYPL1Q16563 259 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 MEX3BQ6ZN04 569 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR52R1Q8NGF1 315 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR14L1PQ8NHC6 308 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 TMEM40Q8WWA1 233 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 TEX37Q96LM6 180 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 ZNF75AQ96N20 296 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 LAMP3Q9UQV4 416 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 V9GYH0 126 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 MARF1Q9Y4F3 1742 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 C5orf52A6NGY3 159 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 ZNF814B7Z6K7 855 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 MFNGO00587 321 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 LRP3O75074 770 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 CXCL3P19876 107 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 GALP22466 123 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 NHLRC3Q5JS37 347 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 PRAMEF9Q5VWM5 478 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 ANKRD16Q6P6B7 361 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 KCNJ15Q99712 375 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 RHNO1Q9BSD3 238 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 HINT2Q9BX68 163 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 CHST8Q9H2A9 424 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 FBXO45P0C2W1 286 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 FOLR1P15328 257 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 TSFMP43897 325 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 UBE2NP61088 152 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 EIF4E3Q8N5X7 224 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR11H7Q8NGC8 314 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR51S1Q8NGJ8 323 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 OR5M1Q8NGP8 315 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 UHRF2Q96PU4 802 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 PARP12Q9H0J9 701 aaKnown RBP5.21□□□□□ -1.58
VCAN-201ENST00000265077 PPP6CO00743 305 aa5.21□□□□□ -1.58
VCAN-201ENST00000265077 MT-ATP6P00846 226 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms