RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PLCXD2Q0VAA5 305 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 EIF2S3LQ2VIR3 472 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 GFOD2Q3B7J2 385 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC16A13Q7RTY0 426 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 TMEM200AQ86VY9 491 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 PRSS35Q8N3Z0 413 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 C10orf53Q8N6V4 93 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 NUDCD2Q8WVJ2 157 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 WNT2BQ93097 391 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SMIM8Q96KF7 97 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 GAL3ST4Q96RP7 486 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ADOQ96SZ5 270 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC6A7Q99884 636 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 TBL1XR1Q9BZK7 514 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 WWTR1Q9GZV5 400 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 NIT2Q9NQR4 276 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ASH2LQ9UBL3 628 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 LPAR3Q9UBY5 353 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 IKZF2Q9UKS7 526 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SIT1Q9Y3P8 196 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ALOX12BO75342 701 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 DUS4LO95620 317 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 MT-ATP6P00846 226 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 CYC1P08574 325 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 GIMD1P0DJR0 217 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 NFYBP25208 207 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 KIR3DL2P43630 455 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 IL13RA1P78552 427 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 HMGN3Q15651 99 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ALG10Q5BKT4 473 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 LYSMD4Q5XG99 296 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 PAPD4Q6PIY7 484 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 LRRC75AQ8NAA5 344 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 GATSQ8NAP1 163 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 OR10AC1Q8NH08 325 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 INTS12Q96CB8 462 aaKnown RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 VN1R1Q9GZP7 353 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 RHOFQ9HBH0 211 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 CHMP1AQ9HD42 196 aaPredicted RBP9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 WIF1Q9Y5W5 379 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SPAG17Q6Q759 2223 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 IGLV3-12A0A075B6K2 115 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 A0A1B0GTH9 108 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 MEGF11A6BM72 1044 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 FAM171A2A8MVW0 826 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 RNASEK-C17orf49H0YIS7 233 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 MFNGO00587 321 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ICOSLGO75144 302 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 DCNP07585 359 aaKnown RBP9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 LYL1P12980 280 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 GP1BBP13224 206 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 RCC1P18754 421 aaPredicted RBP9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 AGAP20933 346 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 CXCR1P25024 350 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 HTR2CP28335 458 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 CENPAP49450 140 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 EIF5AP63241 154 aaKnown RBP9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 SCGB2B2Q4G0G5 96 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 TMEM244Q5VVB8 128 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF627Q7L945 461 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 NAA40Q86UY6 237 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF584Q8IVC4 421 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 C9orf40Q8IXQ3 194 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF321PQ8N8H1 164 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF441Q8N8Z8 693 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 OR51A4Q8NGJ6 313 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC22A8Q8TCC7 542 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 ARSGQ96EG1 525 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 LMF1Q96S06 567 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 CST11Q9H112 138 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 CSAG2Q9Y5P2 127 aa9.65□□□□□ -0.86
CHRNA1-201ENST00000261007 TRAV36DV7A0A075B6V5 113 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 WRBO00258 174 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 LDLRAD4O15165 306 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 HCRTR2O43614 444 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 RENP00797 406 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 IGHV2-70P01814 119 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 CD5P06127 495 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 MUC1P15941 1255 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 FSTP19883 344 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 EPHA8P29322 1005 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 TAS2R31P59538 309 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 CTXN1P60606 82 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 ADAM8P78325 824 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 ZP2Q05996 745 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 PMPCAQ10713 525 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 RNASE10Q5GAN6 216 aaKnown RBP9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 WDR38Q5JTN6 314 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 CBLN3Q6UW01 205 aa9.64□□□□□ -0.87
CHRNA1-201ENST00000261007 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms