RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ACTL6AO96019 429 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 CST2P09228 141 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 CCL1P22362 96 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 SRYQ05066 204 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 CCDC92Q53HC0 331 aaPredicted RBP24.32■■□□□ 1.48
CCM2-201ENST00000258781 ELFN2Q5R3F8 820 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 AGAP6Q5VW22 663 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.32■■□□□ 1.48
CCM2-201ENST00000258781 FAM3DQ96BQ1 224 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 FOXRED1Q96CU9 486 aaPredicted RBP24.32■■□□□ 1.48
CCM2-201ENST00000258781 RNF121Q9H920 327 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 CACNA1GO43497 2377 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 PTPRQQ9UMZ3 2332 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 LOC390937A0A1W2PQ73 354 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 ACOT7O00154 380 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 POU3F4P49335 361 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 MRPS10P82664 201 aaKnown RBP24.32■■□□□ 1.48
CCM2-201ENST00000258781 GPR176Q14439 515 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 SLC10A1Q14973 349 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 SLC36A2Q495M3 483 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 TMEM69Q5SWH9 247 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 PLET1Q6UQ28 207 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 PRSS45Q7RTY3 260 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 OR51D1Q8NGF3 324 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 OR51A2Q8NGJ7 313 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 OR1J2Q8NGS2 313 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 SLC25A28Q96A46 364 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 ITPKCQ96DU7 683 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 PLEKHA1Q9HB21 404 aa24.32■■□□□ 1.48
CCM2-201ENST00000258781 MCTS1Q9ULC4 181 aaKnown RBP24.32■■□□□ 1.48
CCM2-201ENST00000258781 CDK2P24941 298 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 HTR2CP28335 458 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 DDOSTP39656 456 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 PTH2RP49190 550 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 LINGO2Q7L985 606 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 FBXO17Q96EF6 278 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 EMC3Q9P0I2 261 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 SLC5A6Q9Y289 635 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 CACNG2Q9Y698 323 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 PRRC2CQ9Y520 2896 aaKnown RBP24.31■■□□□ 1.48
CCM2-201ENST00000258781 CHD8Q9HCK8 2581 aa24.31■■□□□ 1.48
CCM2-201ENST00000258781 APOC1P02654 83 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 CD3GP09693 182 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 OTX1P32242 354 aaPredicted RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 PLA2G5P39877 138 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 SPOCK1Q08629 439 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 C1orf100Q5SVJ3 147 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 ADAT3Q96EY9 351 aaPredicted RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 ALKBH3Q96Q83 286 aaPredicted RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 GPR35Q9HC97 309 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 GABARAPH6UMI1 98 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 TFECO14948 347 aaPredicted RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 SLC2A1P11166 492 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 GALK2Q01415 458 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 C2orf76Q3KRA6 126 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 ZNF529Q6P280 563 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 ANKRD16Q6P6B7 361 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 FAM57BQ71RH2 274 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 ABHD12BQ7Z5M8 362 aaPredicted RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 LYPD6Q86Y78 171 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 TOMM5Q8N4H5 51 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 C7orf50Q9BRJ6 194 aaKnown RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 RNF122Q9H9V4 155 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 GPR84Q9NQS5 396 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 NOSIPQ9Y314 301 aaKnown RBP24.3■■□□□ 1.48
CCM2-201ENST00000258781 ZNF407Q9C0G0 2248 aa24.3■■□□□ 1.48
CCM2-201ENST00000258781 BDKRB2P30411 391 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 CAPZA1P52907 286 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 RAB35Q15286 201 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 GLYATL3Q5SZD4 288 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 DOK3Q7L591 496 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 OR1M1Q8NGA1 313 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 OR5D14Q8NGL3 314 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 HPS1Q92902 700 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 LINC00470Q9BZP3 86 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 ZNF319Q9P2F9 582 aa24.29■■□□□ 1.48
CCM2-201ENST00000258781 ITGB2P05107 769 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 ZNF20P17024 532 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 SLC6A1P30531 599 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 GNALP38405 381 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 TAS2R20P59543 309 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 ZNF813Q6ZN06 617 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 KRT74Q7RTS7 529 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 AKAP14Q86UN6 197 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 FOXB1Q99853 325 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 PARPBPQ9NWS1 579 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 PLEK2Q9NYT0 353 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 NLKQ9UBE8 527 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 DNAJC13O75165 2243 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 MEIOCA2RUB1 952 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 CENPXA8MT69 81 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 XRCC3O43542 346 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 SCRN3Q0VDG4 424 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 PLA2G7Q13093 441 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 CEACAM16Q2WEN9 425 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 RNASE12Q5GAN4 147 aaKnown RBP24.28■■□□□ 1.48
CCM2-201ENST00000258781 COMMD2Q86X83 199 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 SPTSSAQ969W0 71 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 PGAM5Q96HS1 289 aa24.28■■□□□ 1.48
CCM2-201ENST00000258781 SORCS2Q96PQ0 1159 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms