RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NFAM1Q8NET5 270 aaPredicted RBP13.56□□□□□ -0.24
DDX56-201ENST00000258772 OR10S1Q8NGN2 331 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 NUDCD2Q8WVJ2 157 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 FOXQ1Q9C009 403 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SERINC1Q9NRX5 453 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 B3GALT5Q9Y2C3 310 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 CDK2AP1O14519 115 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 EFNA2O43921 213 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 IL2RAP01589 272 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 FOSL2P15408 326 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 GLB1P16278 677 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 ATF4P18848 351 aaPredicted RBP13.55□□□□□ -0.24
DDX56-201ENST00000258772 CD96P40200 585 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 CLDN6P56747 220 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 GPR85P60893 370 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 ZMYND11Q15326 602 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 LRRC37A5PQ49AS3 106 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 TFAP2EQ6VUC0 442 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 KMT5CQ86Y97 462 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 OR5D14Q8NGL3 314 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 PPP1R1CQ8WVI7 109 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 FANCFQ9NPI8 374 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 RASL12Q9NYN1 266 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 KLHL13Q9P2N7 655 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 RPH3AQ9Y2J0 694 aaPredicted RBP13.55□□□□□ -0.24
DDX56-201ENST00000258772 ASCC3Q8N3C0 2202 aaKnown RBP13.55□□□□□ -0.24
DDX56-201ENST00000258772 KANTRA0A1W2PQU2 76 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 C9orf170A2RU37 121 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 TRIM77I1YAP6 450 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 STK17BO94768 372 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 SRFP11831 508 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 LAP3P28838 519 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 IL13RA1P78552 427 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 ANKRD37Q7Z713 158 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 MITD1Q8WV92 249 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 MRPL13Q9BYD1 178 aaKnown RBP13.55□□□□□ -0.24
DDX56-201ENST00000258772 ALKBH4Q9NXW9 302 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 B3GAT1Q9P2W7 334 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 SLC5A6Q9Y289 635 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 HRH3Q9Y5N1 445 aa13.55□□□□□ -0.24
DDX56-201ENST00000258772 GNB3P16520 340 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 RAB3AP20336 220 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 HRH1P35367 487 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 ATP1B3P54709 279 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 ZNF529Q6P280 563 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 ANGPTL5Q86XS5 388 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 SLC25A45Q8N413 288 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 OR13C9Q8NGT0 318 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 OR10K1Q8NGX5 313 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 NUBPLQ8TB37 319 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 MRPS24Q96EL2 167 aaKnown RBP13.54□□□□□ -0.24
DDX56-201ENST00000258772 VRK1Q99986 396 aaPredicted RBP13.54□□□□□ -0.24
DDX56-201ENST00000258772 SELENOIQ9C0D9 397 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 SLC7A5P2Q9GIP4 190 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 PCED1AQ9H1Q7 454 aa13.54□□□□□ -0.24
DDX56-201ENST00000258772 RNF222A6NCQ9 220 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 OR2AT4A6NND4 320 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ETV2O00321 342 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 AVPR2P30518 371 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 GSK3AP49840 483 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 BEX5Q5H9J7 111 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 THEM4Q5T1C6 240 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ACOT7LQ6ZUV0 252 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 MOB3CQ70IA8 216 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 RHOUQ7L0Q8 258 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 OR10R2Q8NGX6 335 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 PHB2Q99623 299 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DNTTIP1Q9H147 329 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 LDAHQ9H6V9 325 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 IFT46Q9NQC8 304 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 FBLN5Q9UBX5 448 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ATXN7L1Q9ULK2 861 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 CA14Q9ULX7 337 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 KCNK7Q9Y2U2 307 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ADAMTS20P59510 1910 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 IGLV3-12A0A075B6K2 115 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 A0A1B0GW55 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 A0A1W2PNV4 684 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 TMEM14DPA8MWL7 114 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 BCL2L11O43521 198 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 SCGNO76038 276 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 HEXBP07686 556 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L2P0CJ85 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L3P0CJ86 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L4P0CJ87 422 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L5P0CJ88 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L6P0CJ89 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 DUX4L7P0CJ90 424 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
DDX56-201ENST00000258772 STARP49675 285 aa13.53□□□□□ -0.24
DDX56-201ENST00000258772 AWAT2Q6E213 333 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms