RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MMP15P51511 669 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 CCR8P51685 355 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC35A1P78382 337 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 EGR3Q06889 387 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 MSMO1Q15800 293 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 DUOXA1Q1HG43 343 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 BSXQ3C1V8 233 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ITPRIPL2Q3MIP1 535 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 OR51T1Q8NGJ9 327 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNRF4Q8WWF5 429 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM46BQ96A09 425 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF775Q96BV0 537 aaPredicted RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 C20orf27Q9GZN8 174 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC2A8Q9NY64 477 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SPG21Q9NZD8 308 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 RHCGQ9UBD6 479 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 AKAP11Q9UKA4 1901 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PIGBOS1A0A0B4J2F0 54 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 IGKV6-21A0A0C4DH24 114 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 C2CD4BA6NLJ0 364 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF878C9JN71 531 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CDC14BO60729 498 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 S1PR2O95136 353 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FTH1P19P0C7X4 201 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PBX2P40425 430 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PPOXP50336 477 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PPP1CBP62140 327 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MRPS34P82930 218 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TPBGQ13641 420 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TCTN1Q2MV58 587 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 LCN10Q6JVE6 187 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TMIGD1Q6UXZ0 262 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MOB3CQ70IA8 216 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 BPIFA4PQ86YQ2 179 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CMTM8Q8IZV2 173 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 METTL27Q8N6F8 245 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM251Q8N6I4 163 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR11H4Q8NGC9 324 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ANKRD9Q96BM1 317 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 EID2BQ96D98 161 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MSLNLQ96KJ4 702 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 KATNBL1Q9H079 304 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 LHX3Q9UBR4 397 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 DDX60LQ5H9U9 1706 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 DNAJC25-GNG10A0A024R161 153 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TEX50A0A1B0GTY4 177 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A1W2PPK0 400 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 A0A1W2PQH9 124 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OTOL1A6NHN0 477 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SERPINE2P07093 398 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FGF5P12034 268 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GDF5P43026 501 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CNN1P51911 297 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 EFNA3P52797 238 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 LSM6P62312 80 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZP2Q05996 745 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 FZD2Q14332 565 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF74Q16587 644 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 NKPD1Q17RQ9 610 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PGGHGQ32M88 737 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TCEAL8Q8IYN2 117 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 NDRG1Q92597 394 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 GALNT14Q96FL9 552 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SMOC1Q9H4F8 434 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF286AQ9HBT8 521 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SEMA5BQ9P283 1151 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 APOBEC3BQ9UH17 382 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OGG1O15527 345 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SRPX2O60687 465 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OPN1SWP03999 348 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CSTBP04080 98 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 TACR2P21452 398 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZBTB25P24278 435 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 APOBEC3AP31941 199 aaPredicted RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 PYCR1P32322 319 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CEACAM3P40198 252 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF90Q03938 601 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SOWAHAQ2M3V2 549 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 RPEL1Q2QD12 228 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 HENMT1Q5T8I9 393 aaKnown RBP6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 KDM4DQ6B0I6 523 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SUMF1Q8NBK3 374 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4K1Q8NGD4 311 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR5A1Q8NGJ0 315 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR5B3Q8NH48 314 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC2A12Q8TD20 617 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SGK494Q96LW2 274 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SPIN2AQ99865 258 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 SPIN2BQ9BPZ2 258 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 MYH8P13535 1937 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 LY75O60449 1722 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 CDHR4A6H8M9 788 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 G3V3Y1 287 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 M0QZ24 198 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 OR1F1O43749 312 aa6.14□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF623O75123 536 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms