RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 LRRN1Q6UXK5 716 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 ZNF841Q6ZN19 808 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 DPY19L2P2Q6ZN68 376 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 CYP4Z1Q86W10 505 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 FAM86B1Q8N7N1 296 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 OR52E2Q8NGJ4 325 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 OR5L1Q8NGL2 311 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 Q8TCH9 128 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 RAB40AQ8WXH6 277 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 SLC25A28Q96A46 364 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 NEIL1Q96FI4 390 aaPredicted RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 HOPXQ9BPY8 73 aaPredicted RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 SLITRK2Q9H156 845 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 UNKLQ9H9P5 680 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 PNRC2Q9NPJ4 139 aaKnown RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 MMP24Q9Y5R2 645 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 IER3IP1Q9Y5U9 82 aa8.6□□□□□ -1.03
VPS50-201ENST00000251739 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
VPS50-201ENST00000251739 TRAV40A0A0B4J280 105 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 UNC119BA6NIH7 251 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 C22orf46C9J442 243 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 PHYHO14832 338 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ARPC3O15145 178 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ALX3O95076 343 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ZNF205O95201 554 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 PTBP3O95758 552 aaKnown RBP8.59□□□□□ -1.03
VPS50-201ENST00000251739 CYB5R3P00387 301 aaPredicted RBP8.59□□□□□ -1.03
VPS50-201ENST00000251739 SEMG1P04279 462 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ACSM4P0C7M7 580 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 NCK1P16333 377 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 SELEP16581 610 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 RHCEP18577 417 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 CRABP1P29762 137 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 PSMB10P40306 273 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 PITPNBP48739 271 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 MAB21L1Q13394 359 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 GK2Q14410 553 aaPredicted RBP8.59□□□□□ -1.03
VPS50-201ENST00000251739 FGD3Q5JSP0 725 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 CLEC12AQ5QGZ9 265 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 FAM201AQ5SY85 155 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 SLC18B1Q6NT16 456 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 CORO6Q6QEF8 472 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 CFAP77Q6ZQR2 320 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 FKBP9P1Q75LS8 142 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ZBTB46Q86UZ6 589 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 MOGAT3Q86VF5 341 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 FITM2Q8N6M3 262 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 CELF2-AS1Q8N7Q2 184 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ATG16L2Q8NAA4 619 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 BHLHE23Q8NDY6 225 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 GJC3Q8NFK1 279 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 RERGLQ9H628 205 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 ARGLU1Q9NWB6 273 aaPredicted RBP8.59□□□□□ -1.03
VPS50-201ENST00000251739 B9D1Q9UPM9 204 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 POLR1DQ9Y2S0 133 aa8.59□□□□□ -1.03
VPS50-201ENST00000251739 IGHV3OR16-10A0A075B7F0 116 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 IGHV3-64DA0A0J9YX35 117 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 MEGF11A6BM72 1044 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 NDUFAB1O14561 156 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 GSTA4O15217 222 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 HLA-DPB1P04440 258 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 ANOS1P23352 680 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 OTX1P32242 354 aaPredicted RBP8.58□□□□□ -1.04
VPS50-201ENST00000251739 GGT2P36268 569 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 CD200P41217 278 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 MTNR1AP48039 350 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 RPS6KA3P51812 740 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 GNB2P62879 340 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 DBPQ10586 325 aaPredicted RBP8.58□□□□□ -1.04
VPS50-201ENST00000251739 ECH1Q13011 328 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 WDR25Q64LD2 544 aaPredicted RBP8.58□□□□□ -1.04
VPS50-201ENST00000251739 DNM1P34Q6PK57 102 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 SMARCD3Q6STE5 483 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 LYPD2Q6UXB3 125 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 BTNL3Q6UXE8 466 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 DCDC5Q6ZRR9 648 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 RRM2BQ7LG56 351 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 C1orf87Q8N0U7 546 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 OR6V1Q8N148 313 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 TAF15Q92804 592 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS50-201ENST00000251739 ERGIC1Q969X5 290 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 FAM162AQ96A26 154 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 PLEKHA8Q96JA3 519 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 CDADC1Q9BWV3 514 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 MS4A7Q9GZW8 240 aaPredicted RBP8.58□□□□□ -1.04
VPS50-201ENST00000251739 WDR76Q9H967 626 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 EFCAB1Q9HAE3 211 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 DCAF13Q9NV06 445 aaKnown RBP8.58□□□□□ -1.04
VPS50-201ENST00000251739 CYB5R1Q9UHQ9 305 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 RPS6KA6Q9UK32 745 aa8.58□□□□□ -1.04
VPS50-201ENST00000251739 OR6C68A6NDL8 312 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
VPS50-201ENST00000251739 FAM20BO75063 409 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 DIRAS1O95057 198 aa8.57□□□□□ -1.04
VPS50-201ENST00000251739 MMP9P14780 707 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms