RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 ADPRHL1Q8NDY3 354 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 AQP3Q92482 292 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 PPP1R14AQ96A00 147 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 FOXN4Q96NZ1 517 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 CRB3Q9BUF7 120 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 SDHAF2Q9NX18 166 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 ALKBH4Q9NXW9 302 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 CYB5R1Q9UHQ9 305 aa22.17■■□□□ 1.14
RUNDC3A-201ENST00000225441 A0A0D9SG52 128 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 A0A1W2PNV4 684 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 C9orf172C9J069 976 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 KRBOX1C9JBD0 128 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 H3BSH0 61 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 ZNF735P0CB33 412 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 HLA-GP17693 338 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 HSF1Q00613 529 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 C2orf68Q2NKX9 166 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 SLC25A53Q5H9E4 307 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 OR8S1Q8NH09 359 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 RHBDD3Q9Y3P4 386 aa22.16■■□□□ 1.14
RUNDC3A-201ENST00000225441 FXYD6-FXYD2A0A087WZ82 144 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 C17orf51A8MQB3 221 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 BET1O15155 118 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 WISP1O95388 367 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 BPNT1O95861 308 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 AMY2AP04746 511 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 TBPP20226 339 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 BDKRB2P30411 391 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 LRFN4Q6PJG9 635 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 RHOUQ7L0Q8 258 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 JAGN1Q8N5M9 183 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 EIF4E3Q8N5X7 224 aaKnown RBP22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 FXYD6Q9H0Q3 95 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 GDF2Q9UK05 429 aaPredicted RBP22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 TM4SF5O14894 197 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 RAD1O60671 282 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 FAHD2BQ6P2I3 314 aaPredicted RBP22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 KLHL24Q6TFL4 600 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 C6orf15Q6UXA7 325 aaPredicted RBP22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 OVCH2Q7RTZ1 564 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 ZNF584Q8IVC4 421 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 ZDHHC22Q8N966 263 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 FAM46BQ96A09 425 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 FAHD2AQ96GK7 314 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 PPA2Q9H2U2 334 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 MOB1AQ9H8S9 216 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 CGGBP1Q9UFW8 167 aaPredicted RBP22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 GLS2Q9UI32 602 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 ZNF292O60281 2723 aa22.15■■□□□ 1.14
RUNDC3A-201ENST00000225441 A0A1B0GTI1 187 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 DCDC2BA2VCK2 349 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 SIX6O95475 246 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 ERCC1P07992 297 aaPredicted RBP22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 TLE3Q04726 772 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 TMEM164Q5U3C3 297 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 MDGA2Q7Z553 956 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 HSD17B13Q7Z5P4 300 aaPredicted RBP22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 NFAM1Q8NET5 270 aaPredicted RBP22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 OR10H5Q8NGA6 315 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 DVL3Q92997 716 aaPredicted RBP22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 SPRY4Q9C004 299 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 MFFQ9GZY8 342 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 KCNK15Q9H427 330 aa22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 ZFHX2Q9C0A1 2572 aaPredicted RBP22.14■■□□□ 1.13
RUNDC3A-201ENST00000225441 IGLV3-32A0A0A0MS00 114 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 LOC105371267A0A1B0GV96 52 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 MPZL1O95297 269 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 UBBP0CG47 229 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 HLA-DOBP13765 273 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 RPS27AP62979 156 aaKnown RBP22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 UBA52P62987 128 aaKnown RBP22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 OR7A5Q15622 319 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 DCAF12L2Q5VW00 463 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 LIN54Q6MZP7 749 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 PAPD4Q6PIY7 484 aaKnown RBP22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 ZNF813Q6ZN06 617 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 BPIFB2Q8N4F0 458 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 SLC22A24Q8N4F4 322 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 OR5M9Q8NGP3 310 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 MRGPRX4Q96LA9 322 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 CHST6Q9GZX3 395 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 SLC25A32Q9H2D1 315 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 SDHAF3Q9NRP4 125 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 FAM206AQ9NX38 181 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 PADI1Q9ULC6 663 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 RPH3AQ9Y2J0 694 aaPredicted RBP22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 IGHV3-20A0A0C4DH32 117 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 MEIS3P1A6NDR6 274 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 LIPT2A6NK58 231 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 SLC25A4P12235 298 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 MGMTP16455 207 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 NHLH1Q02575 133 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 SPOCK1Q08629 439 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 ZNF345Q14585 488 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 ZNF260Q3ZCT1 412 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 THEM4Q5T1C6 240 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 ATPAF1Q5TC12 328 aaPredicted RBP22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 OR51A2Q8NGJ7 313 aa22.13■■□□□ 1.13
RUNDC3A-201ENST00000225441 OR5L2Q8NGL0 311 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms