RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 DUSP1P28562 367 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 LIPAP38571 399 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 DVL1P1P54792 670 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-201ENST00000219334 B4GALNT1Q00973 533 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ALKBH6Q3KRA9 238 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 OR2B11Q5JQS5 317 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ADGRF3Q8IZF5 1079 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 AKR7LQ8NHP1 331 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SPACA5Q96QH8 159 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 UGT2A1Q9Y4X1 527 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 CCR6P51684 374 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 RAB1AP62820 205 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF85Q03923 595 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 SIGLEC14Q08ET2 396 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 OPCMLQ14982 345 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ANKRD34AQ69YU3 496 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ALKAL2Q6UX46 152 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 NOXO1Q8NFA2 376 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 C20orf85Q9H1P6 137 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 A0A087WUJ7 227 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 CT45A10P0DMU9 189 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 BMP5P22003 454 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 TSEN54Q7Z6J9 526 aaKnown RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 EXOSC3Q9NQT5 275 aaKnown RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 RPS10-NUDT3A0A1W2PQS6 291 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 IMPA2O14732 288 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ABCD3P28288 659 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 RPS27P42677 84 aaKnown RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 RPS10P46783 165 aaKnown RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 JMJD6Q6NYC1 403 aaPredicted RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 GPBAR1Q8TDU6 330 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 POM121CA8CG34 1229 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 IGFBP1P08833 259 aaPredicted RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ACKR3P25106 362 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 UBE2G1P62253 170 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 CARFQ8N187 725 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 RNF141Q8WVD5 230 aa17.13■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF71Q9NQZ8 489 aaPredicted RBP17.13■□□□□ 0.33
SMPD3-201ENST00000219334 TRGV10A0A0A0MS01 117 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 HLA-HP01893 362 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 SPATA46Q5T0L3 261 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 LIN7CQ9NUP9 197 aaKnown RBP17.12■□□□□ 0.33
SMPD3-201ENST00000219334 PRSS45Q7RTY3 260 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 SVBPQ8N300 66 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 SPNS1Q9H2V7 528 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 POFUT1Q9H488 388 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 RANGRFQ9HD47 186 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-201ENST00000219334 A3GALT2U3KPV4 340 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 MAST2Q6P0Q8 1798 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 OPRM1P35372 400 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 AQP6Q13520 282 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 SLC36A1Q7Z2H8 476 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 GON7Q9BXV9 100 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 SLC39A7Q92504 469 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 B9D1Q9UPM9 204 aa17.12■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF121P58317 390 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 SOHLH1Q5JUK2 328 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 OR2I1PQ8NGU4 316 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 NMES1Q9C002 83 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 HOXC4P09017 264 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 FLI1Q01543 452 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 SOWAHCQ53LP3 525 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 GALNT16Q8N428 558 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 OR13C8Q8NGS7 320 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 PINX1Q96BK5 328 aaKnown RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 SLC25A19Q9HC21 320 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 ZFP64Q9NPA5 681 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 ZAR1LA6NP61 321 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 ADRA2CP18825 462 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 PTBP1P26599 531 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 HMGN3Q15651 99 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 ADGRG3Q86Y34 549 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF439Q8NDP4 499 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 PURGQ9UJV8 347 aaKnown RBP17.11■□□□□ 0.33
SMPD3-201ENST00000219334 SLC22A13Q9Y226 551 aa17.11■□□□□ 0.33
SMPD3-201ENST00000219334 FAM221AA4D161 298 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 TFAP2AP05549 437 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 COL9A1P20849 921 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 DDOSTP39656 456 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF83P51522 516 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 FUT6P51993 359 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 SLC35A2P78381 396 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 VASH2Q86V25 355 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 ST3GAL6Q9Y274 331 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 CHST2Q9Y4C5 530 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 OR5G3P0C626 314 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 ELLP55199 621 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-201ENST00000219334 LYPD8Q6UX82 237 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 OR10G3Q8NGC4 313 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 GNRHR2Q96P88 292 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 ZNF251Q9BRH9 671 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 PRDM7Q9NQW5 492 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 C20orf202A1L168 122 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 ANKRD37Q7Z713 158 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 OR1F12Q8NHA8 337 aa17.1■□□□□ 0.33
SMPD3-201ENST00000219334 C11orf54Q9H0W9 315 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms