RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 FAHD2AQ96GK7 314 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 LTBP1Q14766 1721 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 CT62P0C5K7 136 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 MLF1P58340 268 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 ALKBH1Q13686 389 aaKnown RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 OR52I1Q8NGK6 324 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 F8W036 122 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 H7C1Q1 480 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 CSRP1P21291 193 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 CD79BP40259 229 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 GPM6AP51674 278 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 BLOC1S1P78537 153 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 RBMXL3Q8N7X1 1067 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 RRASP10301 218 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 HTR2CP28335 458 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 AGTR1P30556 359 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 GLIPR1L1Q6UWM5 242 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 CCDC28AQ8IWP9 274 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 APC2O95996 2303 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 IFNA1P01562 189 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 CPEP16870 476 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 S100A7P31151 101 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 ARRB2P32121 409 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 PDCD1Q15116 288 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 MSMO1Q15800 293 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 MRPS24Q96EL2 167 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 ZIC2O95409 532 aaPredicted RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 NRARPQ7Z6K4 114 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 SLC22A24Q8N4F4 322 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 SOX15O60248 233 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 PATE4P0C8F1 98 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 ACP1P24666 158 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 CSF2RBP32927 897 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 EBPQ15125 230 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 SMIM21Q3B7S5 101 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 HACD4Q5VWC8 232 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 NUBPLQ8TB37 319 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 OPN3Q9H1Y3 402 aaPredicted RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
SIX4-201ENST00000216513 GPR84Q9NQS5 396 aa12.35□□□□□ -0.43
SIX4-201ENST00000216513 M0QZ24 198 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 NTN1O95631 604 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 RAB40ALP0C0E4 278 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 ASIC5Q9NY37 505 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 MEIOCA2RUB1 952 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 DNAJB6O75190 326 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
SIX4-201ENST00000216513 MT-CO2P00403 227 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 XKR7Q5GH72 579 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 ACOXLQ9NUZ1 547 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 TAS2R8Q9NYW2 309 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 OR5V1Q9UGF6 321 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
SIX4-201ENST00000216513 MDFIC2A0A1B0GVS7 189 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 H0Y8G0 127 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 KCNG3Q8TAE7 436 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 TCTEX1D2Q8WW35 142 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 ZNF205O95201 554 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 AGAP6Q5VW22 663 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 NXNL2Q5VZ03 156 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 METTL17Q9H7H0 456 aaPredicted RBP12.34□□□□□ -0.43
SIX4-201ENST00000216513 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
SIX4-201ENST00000216513 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 CNTNAP3BQ96NU0 1288 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 OR51J1Q9H342 316 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
SIX4-201ENST00000216513 LIN7BQ9HAP6 207 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
SIX4-201ENST00000216513 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 GPX2P18283 190 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 CA6P23280 308 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 ERP29P30040 261 aaKnown RBP12.33□□□□□ -0.44
SIX4-201ENST00000216513 ALDH3B1P43353 468 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 AGERQ15109 404 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 SHEQ5VZ18 495 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 ANGPTL5Q86XS5 388 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 UBALD1Q8TB05 177 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 FBXW5Q969U6 566 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 IGHV1-45A0A0A0MS14 117 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 FGF5P12034 268 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 LIPAP38571 399 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 GSK3AP49840 483 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
SIX4-201ENST00000216513 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms