RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MEPCEQ7L2J0 689 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 PEG10Q86TG7 708 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 LRP11Q86VZ4 500 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 TMEM123Q8N131 208 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 FNDC8Q8TC99 324 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 GCDHQ92947 438 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 YIPF5Q969M3 257 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ZMYND19Q96E35 227 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 SYT3Q9BQG1 590 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ULBP2Q9BZM5 246 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 LINC00470Q9BZP3 86 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 NUAK2Q9H093 628 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 CRLF2Q9HC73 371 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 GLTPQ9NZD2 209 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 MYEF2Q9P2K5 600 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 FZR1Q9UM11 496 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 RPL36Q9Y3U8 105 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 SPEF1Q9Y4P9 236 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 A0A0A6YYJ9 748 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 TMEM89A2RUT3 159 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CCDC182A6NF36 153 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 EFCAB10A6NFE3 127 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 SLC22A31A6NKX4 558 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CENPBD1B2RD01 187 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 KHDRBS3O75525 346 aaKnown RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 NCR1O76036 304 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF432O94892 652 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 GLCEO94923 617 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 APOL3O95236 402 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 MRPL3P09001 348 aaKnown RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 QDPRP09417 244 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 DBTP11182 482 aaKnown RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CTLA4P16410 223 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 HTR1FP30939 366 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 GPR6P46095 362 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CAPZA2P47755 286 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 MTNR1AP48039 350 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF84P51523 738 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CSNK2BP67870 215 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CEACAM16Q2WEN9 425 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 SLC35D3Q5M8T2 416 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 THEM4Q5T1C6 240 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 LAIR2Q6ISS4 152 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 AHSA2Q719I0 299 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 SHFQ7M4L6 423 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 C20orf196Q8IYI0 205 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 OR6V1Q8N148 313 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 FAM169BQ8N8A8 192 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 SGMS2Q8NHU3 365 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF418Q8TF45 676 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 ZFAND2BQ8WV99 257 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 PTP4A1Q93096 173 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 TMEM54Q969K7 222 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 DDOQ99489 341 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 MRPL13Q9BYD1 178 aaKnown RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 NMNAT2Q9BZQ4 307 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CCDC90BQ9GZT6 254 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 RACGAP1Q9H0H5 632 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 GPR35Q9HC97 309 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF275Q9NSD4 429 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 WARS2Q9UGM6 360 aaKnown RBP8.57□□□□□ -1.04
PHGDH-222ENST00000641587 PCDHB10Q9UN67 800 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 B9D1Q9UPM9 204 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 CMAHPQ9Y471 501 aa8.57□□□□□ -1.04
PHGDH-222ENST00000641587 WNK2Q9Y3S1 2297 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 IGLV1-36A0A0B4J1U3 117 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 IRGMA1A4Y4 181 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 TVP23AA6NH52 213 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 RPL36A-HNRNPH2H7BZ11 118 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 M0R233 179 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 DCTN6O00399 190 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 SYNGR3O43761 229 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 HLA-HP01893 362 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 CCDC159P0C7I6 412 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 GAAP10253 952 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 EPHA1P21709 976 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 PCMT1P22061 227 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 SLC2A5P22732 501 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 CRHBPP24387 322 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 GSTT1P30711 240 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 NAA10P41227 235 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-222ENST00000641587 GUCA1AP43080 201 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-222ENST00000641587 SH3BGRP55822 239 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-222ENST00000641587 HILS1P60008 231 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 CXCR4P61073 352 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 GLO1Q04760 184 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 ALKBH6Q3KRA9 238 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 KLHL22Q53GT1 634 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 AWAT1Q58HT5 328 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 FAHD2BQ6P2I3 314 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-222ENST00000641587 SLC25A47Q6Q0C1 308 aa8.56□□□□□ -1.04
PHGDH-222ENST00000641587 LYPD4Q6UWN0 246 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms