RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 DDX28Q9NUL7 540 aaKnown RBP18.58■□□□□ 0.56
SCN1B-206ENST00000638536 SLCO1C1Q9NYB5 712 aa18.58■□□□□ 0.56
SCN1B-206ENST00000638536 PTTG3PQ9NZH4 202 aa18.58■□□□□ 0.56
SCN1B-206ENST00000638536 FBXO9Q9UK97 447 aaPredicted RBP18.58■□□□□ 0.56
SCN1B-206ENST00000638536 NF1P21359 2839 aa18.58■□□□□ 0.56
SCN1B-206ENST00000638536 ABCA2Q9BZC7 2435 aa18.58■□□□□ 0.56
SCN1B-206ENST00000638536 CCDC182A6NF36 153 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 EI24O14681 340 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 ALPLP05186 524 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 APOFQ13790 326 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 TCEANCQ8N8B7 351 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 DCLRE1CQ96SD1 692 aaKnown RBP18.57■□□□□ 0.56
SCN1B-206ENST00000638536 C1QTNF5Q9BXJ0 243 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 CENPMQ9NSP4 180 aa18.57■□□□□ 0.56
SCN1B-206ENST00000638536 ZSCAN5BA6NJL1 495 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 PRODHO43272 600 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 TLX2O43763 284 aaPredicted RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 COL8A2P25067 703 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 NAA10P41227 235 aaPredicted RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 PDLIM4P50479 330 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 BLVRAP53004 296 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 HCCSP53701 268 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 CCL8P80075 99 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 HNRNPA0Q13151 305 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 EIF2B1Q14232 305 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 SPRNQ5BIV9 151 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 C1orf174Q8IYL3 243 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 RBM4BQ9BQ04 359 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 ABHD6Q9BV23 337 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 GABARAPL3Q9BY60 117 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 RIBC2Q9H4K1 309 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 MSL2Q9HCI7 577 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 KLHDC2Q9Y2U9 406 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 FN1P02751 2386 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 VWC2LB2RUY7 222 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 LY6G6DO95868 133 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 OTX1P32242 354 aaPredicted RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 DSCR9P59020 149 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 RPS7P62081 194 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 ECH1Q13011 328 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 UBASH3BQ8TF42 649 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 APOBEC3DQ96AK3 386 aaPredicted RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 IL4I1Q96RQ9 567 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 TEAD3Q99594 435 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 SLC29A1Q99808 456 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 TEX12Q9BXU0 123 aa18.56■□□□□ 0.56
SCN1B-206ENST00000638536 PURGQ9UJV8 347 aaKnown RBP18.56■□□□□ 0.56
SCN1B-206ENST00000638536 MALRD1Q5VYJ5 2156 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 M0R135 149 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 RBMXP38159 391 aaKnown RBP18.55■□□□□ 0.56
SCN1B-206ENST00000638536 RGS6P49758 472 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 ZNF81P51508 661 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 PRKXP51817 358 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 KRTAP1-1Q07627 177 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 TSTQ16762 297 aaKnown RBP18.55■□□□□ 0.56
SCN1B-206ENST00000638536 SNAI3Q3KNW1 292 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 Q6ZR03 302 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 PQLC1Q8N2U9 271 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 CBR4Q8N4T8 237 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 SNX33Q8WV41 574 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 YIPF5Q969M3 257 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 HAVCR1Q96D42 359 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 ZNF799Q96GE5 643 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 COPS4Q9BT78 406 aa18.55■□□□□ 0.56
SCN1B-206ENST00000638536 LOC390937A0A1W2PQ73 354 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 H3BSA7 217 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 SPRY3O43610 288 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 IGHV1-46P01743 117 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 LCATP04180 440 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 ERCC1P07992 297 aaPredicted RBP18.54■□□□□ 0.56
SCN1B-206ENST00000638536 SLC2A1P11166 492 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 ZIK1Q3SY52 487 aaPredicted RBP18.54■□□□□ 0.56
SCN1B-206ENST00000638536 SLC35D3Q5M8T2 416 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 ZNF786Q8N393 782 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 UBE2FQ969M7 185 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 BPESC1Q9GZL8 116 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 C2CD3Q4AC94 2353 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 HIVEP2P31629 2446 aa18.54■□□□□ 0.56
SCN1B-206ENST00000638536 TIMM8AO60220 97 aaPredicted RBP18.53■□□□□ 0.56
SCN1B-206ENST00000638536 LILRA1O75019 489 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 MRPL3P09001 348 aaKnown RBP18.53■□□□□ 0.56
SCN1B-206ENST00000638536 KITLGP21583 273 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 TPTEP56180 551 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 ZSCAN26Q16670 478 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 AADACL4Q5VUY2 407 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 OR2T2Q6IF00 324 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 FBXW12Q6X9E4 464 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 BIVMQ86UB2 503 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 C10orf67Q8IYJ2 551 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 OR5AS1Q8N127 324 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 OTOSQ8NHW6 89 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 TMEM163Q8TC26 289 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 RNF133Q8WVZ7 376 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 USE1Q9NZ43 259 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 GPR160Q9UJ42 338 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 DYSFO75923 2080 aa18.53■□□□□ 0.56
SCN1B-206ENST00000638536 ZNF878C9JN71 531 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 J3QW42 95 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 CSF3P09919 207 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 SLC6A9P48067 706 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms