RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 MED20Q9H944 212 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 CGGBP1Q9UFW8 167 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 CYB5R1Q9UHQ9 305 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 CLUP10909 449 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF250P15622 560 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 SLC25A16P16260 332 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 WNT5AP41221 380 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 LOXL1Q08397 574 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 MAD2L1BPQ15013 274 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 PCGF3Q3KNV8 242 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF362Q5T0B9 420 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 CFAP77Q6ZQR2 320 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 RFPL4BQ6ZWI9 263 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF540Q8NDQ6 660 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 KLF14Q8TD94 323 aaPredicted RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 C10orf105Q8TEF2 133 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 PKP2Q99959 881 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 C9orf16Q9BUW7 83 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 HCAR1Q9BXC0 346 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 NMNAT2Q9BZQ4 307 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 SP140LQ9H930 580 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 S100A14Q9HCY8 104 aa12.67□□□□□ -0.38
HSPG2-214ENST00000635682 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF878C9JN71 531 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 M0R135 149 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 NDUFS8O00217 210 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 MITFO75030 526 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-214ENST00000635682 CLPTM1O96005 669 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 APOC1P02654 83 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 LCATP04180 440 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 DAOP14920 347 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 TNFSF4P23510 183 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 GGT2P36268 569 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF81P51508 661 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 CDC42P60953 191 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 GRB2P62993 217 aaKnown RBP12.66□□□□□ -0.38
HSPG2-214ENST00000635682 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 MBNL2Q5VZF2 373 aaKnown RBP12.66□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF283Q8N7M2 679 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 UBASH3BQ8TF42 649 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 SLC7A6Q92536 515 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 EME1Q96AY2 570 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 ZMYND19Q96E35 227 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF799Q96GE5 643 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 DDOQ99489 341 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 CIB1Q99828 191 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 EGLN1Q9GZT9 426 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 WDR76Q9H967 626 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 IMPAD1Q9NX62 359 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 PTTG3PQ9NZH4 202 aa12.66□□□□□ -0.38
HSPG2-214ENST00000635682 IGLV3-9A0A075B6K5 115 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 LOC390937A0A1W2PQ73 354 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 TMEM129A0AVI4 362 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 ICMTO60725 284 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 NGFP01138 241 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 IGHV3-13P01766 116 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 DBHP09172 617 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 IGHV4-31P0DP07 118 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 NAT2P11245 290 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 SELEP16581 610 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 RPS27P42677 84 aaKnown RBP12.65□□□□□ -0.38
HSPG2-214ENST00000635682 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 DBPQ10586 325 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-214ENST00000635682 APOFQ13790 326 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 TEX30Q5JUR7 227 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 HIST2H3PS2Q5TEC6 136 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 CYB5R2Q6BCY4 276 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 HIST2H3AQ71DI3 136 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 GID4Q8IVV7 300 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 PTP4A1Q93096 173 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 SLAMF6Q96DU3 332 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 MARS2Q96GW9 593 aaKnown RBP12.65□□□□□ -0.38
HSPG2-214ENST00000635682 DIRC2Q96SL1 478 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 BEX2Q9BXY8 128 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 TOR3AQ9H497 397 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 N6AMT1Q9Y5N5 214 aa12.65□□□□□ -0.38
HSPG2-214ENST00000635682 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 EI24O14681 340 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 PHF1O43189 567 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-214ENST00000635682 LYNP07948 512 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 H2BFMP0C1H6 154 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-214ENST00000635682 USF1P22415 310 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-214ENST00000635682 ATP6V1E1P36543 226 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 MPV17P39210 176 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 FAM209AQ5JX71 171 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 SLX4IPQ5VYV7 408 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 LYPD4Q6UWN0 246 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
HSPG2-214ENST00000635682 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms