RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 HSD3B7Q9H2F3 369 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C8orf33Q9H7E9 229 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 COQ10BQ9H8M1 238 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ELOVL3Q9HB03 270 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 FOLH1BQ9HBA9 442 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 POPDC2Q9HBU9 364 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 MCCC2Q9HCC0 563 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DMAP1Q9NPF5 467 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PRSS16Q9NQE7 514 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 AGPAT3Q9NRZ7 376 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NRBP2Q9NSY0 501 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 THUMPD1Q9NXG2 353 aaKnown RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 FBXL12Q9NXK8 326 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 B3GNT2Q9NY97 397 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC25A37Q9NYZ2 338 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 BFARQ9NZS9 450 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ACTR3BQ9P1U1 418 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 STOX2Q9P2F5 926 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SEC14L3Q9UDX4 400 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 GNPTGQ9UJJ9 305 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TMCO1Q9UM00 188 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SNX6Q9UNH7 406 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 BTRCQ9Y297 605 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 GSTK1Q9Y2Q3 226 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR10H1Q9Y4A9 318 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC25A15Q9Y619 301 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CUBNO60494 3623 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 HIVEP2P31629 2446 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OTOGQ6ZRI0 2925 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NF1P21359 2839 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NACAE9PAV3 2078 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A096LNJ9 63 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A0G2JMM0 328 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1B0GVL5 298 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1W2PP18 115 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1W2PPB8 328 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1W2PRS3 328 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PRSS37A4D1T9 235 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LRP5LA4QPB2 252 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PSMB11A5LHX3 300 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF860A6NHJ4 632 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 C17orf51A8MQB3 221 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SERPINE3A8MV23 424 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 KIR3DP1A8MWS1 328 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 E9PBE3 544 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NPIPA7E9PJI5 369 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 F8WDY8 70 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 H3BNH8 94 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DCTN6O00399 190 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DLGAP1O14490 977 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MED7O43513 233 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LANCL1O43813 399 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ANGPTL7O43827 346 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 HUS1O60921 280 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 BCAS1O75363 584 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF324O75467 553 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FOXH1O75593 365 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 B3GALNT1O75752 331 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LYPLA2O95372 231 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CLDN9O95484 217 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 AP2A1O95782 977 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SOD1P00441 154 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ASS1P00966 412 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TNNC2P02585 160 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ALDOBP05062 364 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RHOCP08134 193 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CISD3P0C7P0 127 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZDHHC11BP0C7U3 371 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CHTF8P0CG12 524 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NPIPA8P0DM63 369 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LIPCP11150 499 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 POU2F1P14859 743 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF44P15621 663 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RPA2P15927 270 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CRISP2P16562 243 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 IMPDH1P20839 514 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MAGP20916 626 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 UQCRC2P22695 453 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PSMB5P28074 263 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OTX2P32243 289 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 GTF2H1P32780 548 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RORAP35398 523 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CHI3L1P36222 383 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MARCKSL1P49006 195 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 UBE2AP49459 152 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MNAT1P51948 309 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 EFNB2P52799 333 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 HSD17B7P56937 341 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC7A9P82251 487 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OGDHQ02218 1023 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MADCAM1Q13477 382 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RIPK1Q13546 671 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SELPLGQ14242 412 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 IHHQ14623 411 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OXA1LQ15070 435 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 STK38Q15208 465 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PSG5Q15238 335 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZBTB6Q15916 424 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms